RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 ACADVLP49748 655 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 CYP51A1Q16850 503 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 TATDN3Q17R31 274 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 LINC01620Q4KN68 170 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 TCTEX1D4Q5JR98 221 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 GCNT7Q6ZNI0 430 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 ERASQ7Z444 233 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 ANKRD37Q7Z713 158 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 CDC20BQ86Y33 519 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 ZNF671Q8TAW3 534 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 IL1F10Q8WWZ1 152 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 TESK2Q96S53 571 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 GSDMCQ9BYG8 508 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 PCNX3Q9H6A9 2034 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 GPN2Q9H9Y4 310 aaPredicted RBP3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 CRLS1Q9UJA2 301 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 BLOC1S6Q9UL45 172 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 SPACA6W5XKT8 324 aa3.91□□□□□ -1.78
GAPVD1-211ENST00000467707 ZNF840PA6NDX5 716 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 EFCAB7A8K855 629 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 SRRM5B3KS81 715 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 G3V3Y1 287 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 SLC17A2O00624 439 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 CASKO14936 926 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 PHF1O43189 567 aaPredicted RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 STX11O75558 287 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 JCHAINP01591 159 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 ASNSP08243 561 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 HSPA5P11021 654 aaKnown RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 KRT13P13646 458 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 BCL3P20749 454 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 CALRP27797 417 aaKnown RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 PLOD1Q02809 727 aaPredicted RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 CSTF1Q05048 431 aaKnown RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 PUDPQ08623 228 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 OVGP1Q12889 678 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 IL18R1Q13478 541 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 SLC10A1Q14973 349 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 Q1RN00 199 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 EIPR1Q53HC9 387 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 METTL11BQ5VVY1 283 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 STAC2Q6ZMT1 411 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 HSD11B1LQ7Z5J1 315 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 ZSCAN4Q8NAM6 433 aaPredicted RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 THRSPQ92748 146 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 SDSLQ96GA7 329 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 MRPL39Q9NYK5 338 aaKnown RBP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 TMOD2Q9NZR1 351 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 DPM3Q9P2X0 92 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 PRODH2Q9UF12 536 aa3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 SF3B1O75533 1304 aaKnown RBP eCLIP3.9□□□□□ -1.79
GAPVD1-211ENST00000467707 USP6P35125 1406 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 FAM220BPB1ANY3 271 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 SDHDO14521 159 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 CPLX1O14810 134 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 DUX1O43812 170 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 ZNF354AO60765 605 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 TBX19O60806 448 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 ZNF253O75346 499 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 OPN1LWP04000 364 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 PCCBP05166 539 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 TSPY4P0CV99 314 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 TSPY10P0CW01 314 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 PDHBP11177 359 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 LAMP1P11279 417 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 GATA2P23769 480 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 MAGEA9P43362 315 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 RND3P61587 244 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 LMO4P61968 165 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 NTHL1P78549 312 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 BDH1Q02338 343 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 ATXN7L3Q14CW9 347 aaPredicted RBP3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 SLC36A3Q495N2 470 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 C2orf66Q6UXQ4 117 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 PRSS48Q7RTY5 328 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 P2RY8Q86VZ1 359 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 HSCBQ8IWL3 235 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 BPIFB2Q8N4F0 458 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 KRTAP17-1Q9BYP8 105 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 ELOVL4Q9GZR5 314 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 DUSP12Q9UNI6 340 aa3.89□□□□□ -1.79
GAPVD1-211ENST00000467707 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 A8MUI8 341 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 A8MX80 341 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 CTAGE5O15320 804 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 CLUP10909 449 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 EPB41P11171 864 aaKnown RBP3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 PGAM2P15259 253 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 OTX2P32243 289 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 CDH5P33151 784 aaPredicted RBP3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 SOX6P35712 828 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 HMGCLP35914 325 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 ACVR1BP36896 505 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 XCR1P46094 333 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 GNPDA1P46926 289 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 PAX2Q02962 417 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 RUNX3Q13761 415 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 CCDC57Q2TAC2 916 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 TIMM50Q3ZCQ8 353 aa3.88□□□□□ -1.79
GAPVD1-211ENST00000467707 NCR3LG1Q68D85 454 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms