RNA–Protein interactions for RNA: ENST00000467275.1

ATG3-204, Transcript of autophagy related 3, humanhuman

TSL 3

Gene ATG3, Length 559 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-204ENST00000467275 RPA4Q13156 261 aa2.56□□□□□ -2
ATG3-204ENST00000467275 DPYSL3Q14195 570 aa2.56□□□□□ -2
ATG3-204ENST00000467275 PTGES3Q15185 160 aaKnown RBP2.56□□□□□ -2
ATG3-204ENST00000467275 CLPPQ16740 277 aaPredicted RBP2.56□□□□□ -2
ATG3-204ENST00000467275 HIST2H2AA3Q6FI13 130 aa2.56□□□□□ -2
ATG3-204ENST00000467275 CWC27Q6UX04 472 aaKnown RBP2.56□□□□□ -2
ATG3-204ENST00000467275 PRSS42Q7Z5A4 293 aa2.56□□□□□ -2
ATG3-204ENST00000467275 SLC22A16Q86VW1 577 aa2.56□□□□□ -2
ATG3-204ENST00000467275 CNTN4Q8IWV2 1026 aa2.56□□□□□ -2
ATG3-204ENST00000467275 ZBTB44Q8NCP5 570 aa2.56□□□□□ -2
ATG3-204ENST00000467275 TAF4BQ92750 862 aa2.56□□□□□ -2
ATG3-204ENST00000467275 TMEM101Q96IK0 257 aa2.56□□□□□ -2
ATG3-204ENST00000467275 CCDC43Q96MW1 224 aaKnown RBP2.56□□□□□ -2
ATG3-204ENST00000467275 ATP6V0BQ99437 205 aa2.56□□□□□ -2
ATG3-204ENST00000467275 APMAPQ9HDC9 416 aa2.56□□□□□ -2
ATG3-204ENST00000467275 CD274Q9NZQ7 290 aa2.56□□□□□ -2
ATG3-204ENST00000467275 ONECUT1Q9UBC0 465 aa2.56□□□□□ -2
ATG3-204ENST00000467275 FBXW2Q9UKT8 454 aa2.56□□□□□ -2
ATG3-204ENST00000467275 ENTPD4Q9Y227 616 aa2.56□□□□□ -2
ATG3-204ENST00000467275 PRG3Q9Y2Y8 225 aaPredicted RBP2.56□□□□□ -2
ATG3-204ENST00000467275 MRPS2Q9Y399 296 aaKnown RBP2.56□□□□□ -2
ATG3-204ENST00000467275 IGLV4-60A0A075B6I1 120 aa2.55□□□□□ -2
ATG3-204ENST00000467275 E9PLD3 99 aa2.55□□□□□ -2
ATG3-204ENST00000467275 CACNB4O00305 520 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 STSP08842 583 aa2.55□□□□□ -2
ATG3-204ENST00000467275 HIST1H2AGP0C0S8 130 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 ZNF823P16415 610 aa2.55□□□□□ -2
ATG3-204ENST00000467275 NOP14P78316 857 aaKnown RBP2.55□□□□□ -2
ATG3-204ENST00000467275 PPP2R5CQ13362 524 aa2.55□□□□□ -2
ATG3-204ENST00000467275 HFEQ30201 348 aa2.55□□□□□ -2
ATG3-204ENST00000467275 PARGQ86W56 976 aa2.55□□□□□ -2
ATG3-204ENST00000467275 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 OR4A16Q8NH70 328 aa2.55□□□□□ -2
ATG3-204ENST00000467275 PSMA8Q8TAA3 256 aa2.55□□□□□ -2
ATG3-204ENST00000467275 NEIL3Q8TAT5 605 aa2.55□□□□□ -2
ATG3-204ENST00000467275 HIST1H2ACQ93077 130 aa2.55□□□□□ -2
ATG3-204ENST00000467275 MCHR2Q969V1 340 aa2.55□□□□□ -2
ATG3-204ENST00000467275 C5orf30Q96GV9 206 aa2.55□□□□□ -2
ATG3-204ENST00000467275 NOL4LQ96MY1 436 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 ACAT2Q9BWD1 397 aa2.55□□□□□ -2
ATG3-204ENST00000467275 ANKRD30BQ9BXX2 1392 aa2.55□□□□□ -2
ATG3-204ENST00000467275 TSPYL1Q9H0U9 437 aa2.55□□□□□ -2
ATG3-204ENST00000467275 NXF3Q9H4D5 531 aaKnown RBP2.55□□□□□ -2
ATG3-204ENST00000467275 PRMT8Q9NR22 394 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 CYP39A1Q9NYL5 469 aa2.55□□□□□ -2
ATG3-204ENST00000467275 ZNF282Q9UDV7 671 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 NARFQ9UHQ1 456 aa2.55□□□□□ -2
ATG3-204ENST00000467275 MAD2L2Q9UI95 211 aa2.55□□□□□ -2
ATG3-204ENST00000467275 LCMT1Q9UIC8 334 aa2.55□□□□□ -2
ATG3-204ENST00000467275 APPL1Q9UKG1 709 aa2.55□□□□□ -2
ATG3-204ENST00000467275 FOXA2Q9Y261 457 aaPredicted RBP2.55□□□□□ -2
ATG3-204ENST00000467275 KLHDC2Q9Y2U9 406 aa2.55□□□□□ -2
ATG3-204ENST00000467275 PLEKHG1Q9ULL1 1385 aa2.54□□□□□ -2
ATG3-204ENST00000467275 SERPINE3A8MV23 424 aa2.54□□□□□ -2
ATG3-204ENST00000467275 KERAO60938 352 aa2.54□□□□□ -2
ATG3-204ENST00000467275 PGK2P07205 417 aa2.54□□□□□ -2
ATG3-204ENST00000467275 FERP16591 822 aa2.54□□□□□ -2
ATG3-204ENST00000467275 HLA-DPA1P20036 260 aa2.54□□□□□ -2
ATG3-204ENST00000467275 UGT1A5P35504 534 aa2.54□□□□□ -2
ATG3-204ENST00000467275 STK19P49842 368 aaPredicted RBP2.54□□□□□ -2
ATG3-204ENST00000467275 HERVK_113P61574 105 aa2.54□□□□□ -2
ATG3-204ENST00000467275 ARF5P84085 180 aa2.54□□□□□ -2
ATG3-204ENST00000467275 PAX5Q02548 391 aa2.54□□□□□ -2
ATG3-204ENST00000467275 EGFEM1PQ0D2K5 195 aa2.54□□□□□ -2
ATG3-204ENST00000467275 AP1B1Q10567 949 aa2.54□□□□□ -2
ATG3-204ENST00000467275 RAB35Q15286 201 aa2.54□□□□□ -2
ATG3-204ENST00000467275 CYP51A1Q16850 503 aa2.54□□□□□ -2
ATG3-204ENST00000467275 IFI44LQ53G44 452 aa2.54□□□□□ -2
ATG3-204ENST00000467275 TOR1AIP1Q5JTV8 583 aa2.54□□□□□ -2
ATG3-204ENST00000467275 CHCHD4Q8N4Q1 142 aa2.54□□□□□ -2
ATG3-204ENST00000467275 MGARPQ8TDB4 240 aa2.54□□□□□ -2
ATG3-204ENST00000467275 BLOC1S5Q8TDH9 187 aa2.54□□□□□ -2
ATG3-204ENST00000467275 ST7LQ8TDW4 575 aa2.54□□□□□ -2
ATG3-204ENST00000467275 RDH5Q92781 318 aa2.54□□□□□ -2
ATG3-204ENST00000467275 MYDGFQ969H8 173 aa2.54□□□□□ -2
ATG3-204ENST00000467275 GPR137Q96N19 417 aa2.54□□□□□ -2
ATG3-204ENST00000467275 RSPO3Q9BXY4 272 aaPredicted RBP2.54□□□□□ -2
ATG3-204ENST00000467275 NLNQ9BYT8 704 aa2.54□□□□□ -2
ATG3-204ENST00000467275 SCML2Q9UQR0 700 aa2.54□□□□□ -2
ATG3-204ENST00000467275 KNSTRNQ9Y448 316 aa2.54□□□□□ -2
ATG3-204ENST00000467275 VEGFDO43915 354 aa2.53□□□□□ -2
ATG3-204ENST00000467275 APRTP07741 180 aa2.53□□□□□ -2
ATG3-204ENST00000467275 HMOX1P09601 288 aa2.53□□□□□ -2
ATG3-204ENST00000467275 HTR1EP28566 365 aa2.53□□□□□ -2
ATG3-204ENST00000467275 NUDT1P36639 197 aa2.53□□□□□ -2
ATG3-204ENST00000467275 KCNJ11Q14654 390 aa2.53□□□□□ -2
ATG3-204ENST00000467275 CDC37Q16543 378 aaPredicted RBP2.53□□□□□ -2
ATG3-204ENST00000467275 XKR4Q5GH76 650 aa2.53□□□□□ -2
ATG3-204ENST00000467275 NKAIN2Q5VXU1 208 aa2.53□□□□□ -2
ATG3-204ENST00000467275 B3GLCTQ6Y288 498 aa2.53□□□□□ -2
ATG3-204ENST00000467275 ZNF410Q86VK4 478 aa2.53□□□□□ -2
ATG3-204ENST00000467275 SERPINA12Q8IW75 414 aa2.53□□□□□ -2
ATG3-204ENST00000467275 MLKLQ8NB16 471 aa2.53□□□□□ -2
ATG3-204ENST00000467275 P3H4Q92791 437 aa2.53□□□□□ -2
ATG3-204ENST00000467275 ATP6V0A1Q93050 837 aa2.53□□□□□ -2
ATG3-204ENST00000467275 SNX21Q969T3 373 aa2.53□□□□□ -2
ATG3-204ENST00000467275 HAVCR1Q96D42 359 aa2.53□□□□□ -2
ATG3-204ENST00000467275 EEF2KMTQ96G04 330 aa2.53□□□□□ -2
ATG3-204ENST00000467275 TSPAN18Q96SJ8 248 aa2.53□□□□□ -2
ATG3-204ENST00000467275 CHRDL1Q9BU40 450 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms