RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 TAP2Q03519 686 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 DYRK1AQ13627 763 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ZNF750Q32MQ0 723 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 C2orf76Q3KRA6 126 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ANKRD20A4Q4UJ75 823 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 AARS2Q5JTZ9 985 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ANKRD20A2Q5SQ80 823 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ANKRD20A1Q5TYW2 823 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ANKRD20A3Q5VUR7 823 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 BHLHB9Q6PI77 547 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SCIMPQ6UWF3 145 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 IKBIPQ70UQ0 350 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 H2AFVQ71UI9 128 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ABHD13Q7L211 337 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PIWIL3Q7Z3Z3 882 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CLNKQ7Z7G1 428 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 MOGAT3Q86VF5 341 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CAND1Q86VP6 1230 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 KRT73Q86Y46 540 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 KRT222Q8N1A0 295 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TMEM132CQ8N3T6 1108 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 OR9A1PQ8NGU1 263 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 MBD3L2Q8NHZ7 208 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 NEIL3Q8TAT5 605 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SLC25A43Q8WUT9 341 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TMEM171Q8WVE6 324 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PEX13Q92968 403 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TSLPQ969D9 159 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TM4SF19Q96DZ7 209 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ZMYND19Q96E35 227 aaPredicted RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TBL1YQ9BQ87 522 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SFXN3Q9BWM7 321 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 RBM24Q9BX46 236 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 REG4Q9BYZ8 158 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PAIP1Q9H074 479 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PIGMQ9H3S5 423 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 EXO5Q9H790 373 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CXorf36Q9H7Y0 433 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 SYNPO2LQ9H987 977 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CALHM2Q9HA72 323 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 LRTM1Q9HBL6 345 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CRLF2Q9HC73 371 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TMEM184CQ9NVA4 438 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ALKBH4Q9NXW9 302 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TAS2R3Q9NYW6 316 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 CIDEBQ9UHD4 219 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 PACSIN3Q9UKS6 424 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 RIMKLBQ9ULI2 386 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 NDRG4Q9ULP0 352 aaKnown RBP4.94□□□□□ -1.62
PTCD3-207ENST00000467273 MGAM2Q2M2H8 2515 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 ABCA1O95477 2261 aa4.94□□□□□ -1.62
PTCD3-207ENST00000467273 TENM1Q9UKZ4 2725 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 TRBV11-1A0A0K0K1C0 115 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 ATP6AP2A0A1C7CYW4 349 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 A0A1W2PS29 197 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 OR2W5A6NFC9 320 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 AQP7P3A6NL99 342 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 DEFB108AA8MXU0 73 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 F5H697 171 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 SGK494L7N484 410 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PRMT5O14744 637 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 HAT1O14929 419 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 RGS10O43665 173 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 OR1I1O60431 355 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 CST8O60676 142 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 RDH16O75452 317 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 ATP6AP2O75787 350 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 CDC123O75794 336 aaPredicted RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 P04436 131 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 ITGA5P08648 1049 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PRSS56P0CW18 603 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 CRYGSP22914 178 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PSMA4P25789 261 aaKnown RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 CDKN2BP42772 138 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 TTPAP49638 278 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 GPR143P51810 404 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PNLIPRP1P54315 467 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PRKAG1P54619 331 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 DIO3P55073 304 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 EIF3BP55884 814 aaKnown RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 ATP5J2P56134 94 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 VAMP2P63027 116 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 DYNLT1P63172 113 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 MYL5Q02045 173 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PHKG1Q16816 387 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 TIGD6Q17RP2 521 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 FAM182AQ5T1J6 154 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 METTL11BQ5VVY1 283 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 LIPNQ5VXI9 398 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 OPN5Q6U736 354 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 AFTPHQ6ULP2 937 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PRSS41Q7RTY9 318 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 APTXQ7Z2E3 356 aaKnown RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 VN1R4Q7Z5H5 301 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 LRRC6Q86X45 466 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 PEX5LQ8IYB4 626 aa4.93□□□□□ -1.62
PTCD3-207ENST00000467273 DND1Q8IYX4 353 aaKnown RBP4.93□□□□□ -1.62
PTCD3-207ENST00000467273 ADGRG5Q8IZF4 528 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms