RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 PHF1O43189 567 aaPredicted RBP10.88□□□□□ -0.67
UBR4-211ENST00000467272 SEC14L5O43304 696 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 IL33O95760 270 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 C8BP07358 591 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 IL12BP29460 328 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 STX2P32856 288 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 THBS2P35442 1172 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 ACVR1BP36896 505 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 MAP3K8P41279 467 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 MRPS22P82650 360 aaKnown RBP10.88□□□□□ -0.67
UBR4-211ENST00000467272 VEZF1Q14119 521 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 EXOC3L2Q2M3D2 409 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 MROH9Q5TGP6 573 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 MFSD12Q6NUT3 480 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 GALNT18Q6P9A2 607 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 ZDHHC24Q6UX98 284 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 BEND4Q6ZU67 534 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.88□□□□□ -0.672e-27■□□□□ 8.4
UBR4-211ENST00000467272 DUSP19Q8WTR2 217 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 GFM2Q969S9 779 aaKnown RBP10.88□□□□□ -0.67
UBR4-211ENST00000467272 NPAS1Q99742 590 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 FAIM2Q9BWQ8 316 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 TRIM2Q9C040 744 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 STMN4Q9H169 189 aaPredicted RBP10.88□□□□□ -0.67
UBR4-211ENST00000467272 ELOVL6Q9H5J4 265 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 LRTM1Q9HBL6 345 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 GLRX2Q9NS18 164 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 TMEM160Q9NX00 188 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 SIRT5Q9NXA8 310 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 CPSF2Q9P2I0 782 aaKnown RBP10.88□□□□□ -0.67
UBR4-211ENST00000467272 MCM8Q9UJA3 840 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 EMC9Q9Y3B6 208 aa10.88□□□□□ -0.67
UBR4-211ENST00000467272 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.87□□□□□ -0.671e-9■■■■□ 24.8
UBR4-211ENST00000467272 CADP27708 2225 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 GOLGA8QA0A0J9YX86 632 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 GOLGA8OA6NCC3 632 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 FAM187AA6NFU0 413 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 A8MV72 311 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 SHISA8B8ZZ34 492 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 GOLGA8NF8WBI6 632 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 GOLGA8RI6L899 631 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 SCO2O43819 266 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 NDUFS7O75251 213 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 IL3P08700 152 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 FAM157CP0CG43 387 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 ZNF17P17021 662 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 MAGEA4P43358 317 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 RPS3AP61247 264 aaKnown RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 PRR5P85299 388 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 TRADDQ15628 312 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 KRTAP24-1Q3LI83 254 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 ZNF672Q499Z4 452 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 SGO1Q5FBB7 561 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 RPS27LQ71UM5 84 aaKnown RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 ATG4DQ86TL0 474 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 MARCH3Q86UD3 253 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 DTX2Q86UW9 622 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 EXOC3L1Q86VI1 746 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 SAMD14Q8IZD0 417 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 OR2L13Q8N349 312 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 GTPBP8Q8N3Z3 284 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 OR10H5Q8NGA6 315 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 OR10D3Q8NH80 312 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 SMAP2Q8WU79 429 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 NEUROG1Q92886 237 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 S100PBPQ96BU1 408 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 MTBPQ96DY7 904 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 PHF21BQ96EK2 531 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 ZBED6CLQ96FA7 236 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 TRAF4Q9BUZ4 470 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 SHCBP1LQ9BZQ2 653 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 SLC35C2Q9NQQ7 365 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 SDHAF3Q9NRP4 125 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 TAS2R9Q9NYW1 312 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 TAS2R7Q9NYW3 318 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 VPS29Q9UBQ0 182 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 TMCO1Q9UM00 188 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 CLEC4AQ9UMR7 237 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 C19orf53Q9UNZ5 99 aaPredicted RBP10.87□□□□□ -0.67
UBR4-211ENST00000467272 LIPT1Q9Y234 373 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 RNF115Q9Y4L5 304 aa10.87□□□□□ -0.67
UBR4-211ENST00000467272 PCNX3Q9H6A9 2034 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 UPK1AO00322 258 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 RAD51CO43502 376 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 GPRIN2O60269 458 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 ADAM11O75078 769 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 IGKV1D-16P01601 117 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 IFI6P09912 130 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 HSD3B1P14060 373 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 CHN1P15882 459 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 HSD3B2P26439 372 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 ADH6P28332 368 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 AGTR1P30556 359 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 KRT20P35900 424 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 CDKN1AP38936 164 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 ALDH9A1P49189 494 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 CALCOCO2Q13137 446 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 ERCC6LQ2NKX8 1250 aa10.86□□□□□ -0.67
UBR4-211ENST00000467272 CHRFAM7AQ494W8 412 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms