RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 FUOMA2VDF0 154 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 CLDN24A6NM45 220 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 A8MVJ9 347 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 ADAMDEC1O15204 470 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 ATP1B1P05026 303 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 BCAP31P51572 246 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 KCNJ10P78508 379 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 YOD1Q5VVQ6 348 aaPredicted RBP17.33■□□□□ 0.37
CAPN3-209ENST00000466222 MLIPQ5VWP3 458 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 RAB11FIP2Q7L804 512 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 HORMAD2Q8N7B1 307 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 OR52N2Q8NGI0 321 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 OR5D16Q8NGK9 328 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 RAB8BQ92930 207 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 NEURL3Q96EH8 262 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 PTCHD1Q96NR3 888 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 SIGLEC11Q96RL6 698 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 PRDM9Q9NQV7 894 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 PLCXD1Q9NUJ7 323 aa17.33■□□□□ 0.37
CAPN3-209ENST00000466222 MRPS33Q9Y291 106 aaKnown RBP17.33■□□□□ 0.37
CAPN3-209ENST00000466222 GVINP1Q7Z2Y8 2422 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 DCHS1Q96JQ0 3298 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 RALGAPA1Q6GYQ0 2036 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 MEN1O00255 615 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 CLDN4O14493 209 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 RORAP35398 523 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 MASP1P48740 699 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 RPP38P78345 283 aaKnown RBP17.33■□□□□ 0.36
CAPN3-209ENST00000466222 MGAT2Q10469 447 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 ZNF628Q5EBL2 1059 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 UBE2UQ5VVX9 321 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 PCDHGA1Q9Y5H4 931 aa17.33■□□□□ 0.36
CAPN3-209ENST00000466222 CNOT3O75175 753 aaKnown RBP17.32■□□□□ 0.36
CAPN3-209ENST00000466222 TNFRSF21O75509 655 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 HMGN2P05204 90 aaKnown RBP17.32■□□□□ 0.36
CAPN3-209ENST00000466222 SLC35E2P0CK97 266 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 PSMB9P28065 219 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 MAP2K4P45985 399 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 SELENOWP63302 87 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 DCDP81605 110 aaKnown RBP17.32■□□□□ 0.36
CAPN3-209ENST00000466222 NHLH1Q02575 133 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 ITGADQ13349 1161 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 LASP1Q14847 261 aaKnown RBP17.32■□□□□ 0.36
CAPN3-209ENST00000466222 LAPTM4AQ15012 233 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 EXOSC7Q15024 291 aaKnown RBP17.32■□□□□ 0.36
CAPN3-209ENST00000466222 PRICKLE4Q2TBC4 344 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 GLRX5Q86SX6 157 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 TPD52L3Q96J77 140 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 MROQ9BYG7 248 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 ULBP3Q9BZM4 244 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 SEMA3GQ9NS98 782 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 PISDQ9UG56 409 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 MKL2Q9ULH7 1088 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 ADAMTS20P59510 1910 aa17.32■□□□□ 0.36
CAPN3-209ENST00000466222 OR10H2O60403 315 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 DIRAS1O95057 198 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 FTH1P19P0C7X4 201 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ANXA8P13928 327 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 IDUAP35475 653 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 KRT20P35900 424 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 HSD17B7P56937 341 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 FAAH2Q6GMR7 532 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 CEACAM20Q6UY09 585 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 OLIG3Q7RTU3 272 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ADCK1Q86TW2 530 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 SAMD14Q8IZD0 417 aaPredicted RBP17.31■□□□□ 0.36
CAPN3-209ENST00000466222 NUP43Q8NFH3 380 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 STT3BQ8TCJ2 826 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 DYNC2LI1Q8TCX1 351 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ITPKCQ96DU7 683 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 VN1R1Q9GZP7 353 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 RUBCNLQ9H714 662 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 MAT2BQ9NZL9 334 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 KCNE3Q9Y6H6 103 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 A8MUA0 341 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 KRT75O95678 551 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 RECKO95980 971 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ALOX5P09917 674 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 AQP1P29972 269 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 RHAGQ02094 409 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ATP1A4Q13733 1029 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 TRIM16LQ309B1 348 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 CCDC81Q6ZN84 652 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 P3H2Q8IVL5 708 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 ADAMTS18Q8TE60 1221 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 GIMAP5Q96F15 307 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 RBM18Q96H35 190 aaKnown RBP17.31■□□□□ 0.36
CAPN3-209ENST00000466222 OR1F2PQ96R84 312 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 STRADBQ9C0K7 418 aa17.31■□□□□ 0.36
CAPN3-209ENST00000466222 PRAMEF27A3QJZ7 478 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 B4E171 279 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 HMGN4O00479 90 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 EMC8O43402 210 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 CPNE3O75131 537 aaKnown RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 WBP4O75554 376 aaKnown RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 NADKO95544 446 aaPredicted RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 FADS2O95864 444 aaKnown RBP17.3■□□□□ 0.36
CAPN3-209ENST00000466222 IFNA16P05015 189 aa17.3■□□□□ 0.36
CAPN3-209ENST00000466222 OR12D1P0DN82 309 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms