RNA–Protein interactions for RNA: ENST00000465601.1

CHPF2-202, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 3

Gene CHPF2, Length 782 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-202ENST00000465601 TMEM41AQ96HV5 264 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 ITCHQ96J02 903 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 OR51I1Q9H343 314 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 RMND5AQ9H871 391 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 ZDHHC11Q9H8X9 412 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 SLC6A13Q9NSD5 602 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 GIN1Q9NXP7 522 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 TRIM33Q9UPN9 1127 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 OSGIN2Q9Y236 505 aa11.32□□□□□ -0.6
CHPF2-202ENST00000465601 A0A1B0GTH9 108 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 SNPHO15079 494 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 SCO2O43819 266 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 FADS1O60427 444 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 ANP32DO95626 131 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 OR12D1P0DN82 309 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 GDF1P27539 372 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 EVI2BP34910 448 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 GAS1P54826 345 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 GRAMD1BQ3KR37 738 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 C6orf10Q5SRN2 563 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 METTL21CQ5VZV1 264 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 OR5M10Q6IEU7 315 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 TNFAIP8L2Q6P589 184 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-202ENST00000465601 SLC2A7Q6PXP3 512 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 BNC2Q6ZN30 1099 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-202ENST00000465601 MSANTD1Q6ZTZ1 278 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 TRIML2Q8N7C3 387 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 WDSUB1Q8N9V3 476 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 OR1J4Q8NGS1 313 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 OR4C3Q8NH37 302 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 RNF138Q8WVD3 245 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 XAGE5Q8WWM1 108 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 RAB8BQ92930 207 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 SPDL1Q96EA4 605 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 NEURL3Q96EH8 262 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 RTN4RQ9BZR6 473 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 RABEP2Q9H5N1 569 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 ZNF385DQ9H6B1 395 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 ZNF703Q9H7S9 590 aaPredicted RBP11.31□□□□□ -0.6
CHPF2-202ENST00000465601 SLC52A3Q9NQ40 469 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 PCDHGB3Q9Y5G1 929 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 HRH3Q9Y5N1 445 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 LIPGQ9Y5X9 500 aa11.31□□□□□ -0.6
CHPF2-202ENST00000465601 PTPN13Q12923 2485 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 DUXAA6NLW8 204 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 C17orf51A8MQB3 221 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 TRAPPC6AO75865 159 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 SOX30O94993 753 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 CAPN3P20807 821 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 PTPN6P29350 595 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 TRPC1P48995 793 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 CLK3P49761 638 aaKnown RBP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 SEC24CP53992 1094 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 IRX1P78414 480 aaPredicted RBP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 RBPJQ06330 500 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 STX5Q13190 355 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 RCAN2Q14206 197 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 TOMM20Q15388 145 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 GTDC1Q4AE62 458 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 DCST2Q5T1A1 773 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 APOOLQ6UXV4 268 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 TRILQ7L0X0 811 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 OLIG3Q7RTU3 272 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 FGD2Q7Z6J4 655 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 MARCH3Q86UD3 253 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 RNF130Q86XS8 419 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 CHERPQ8IWX8 916 aaKnown RBP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 PNPT1Q8TCS8 783 aaKnown RBP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 MIPOL1Q8TD10 442 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 ZFP90Q8TF47 636 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 GTF2H4Q92759 462 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 PHF12Q96QT6 1004 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 SDF2Q99470 211 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 G6PC3Q9BUM1 346 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 EXO5Q9H790 373 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 PLSCR2Q9NRY7 297 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 TMEM45AQ9NWC5 275 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 KLHL14Q9P2G3 628 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 B4GALT7Q9UBV7 327 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 C15orf41Q9Y2V0 281 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 WIF1Q9Y5W5 379 aa11.3□□□□□ -0.6
CHPF2-202ENST00000465601 USP9YO00507 2555 aaPredicted RBP11.3□□□□□ -0.6
CHPF2-202ENST00000465601 NPIPA5A0A0B4J1W7 369 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 NPIPA7E9PJI5 369 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 ADAM10O14672 748 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 KRT75O95678 551 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 OXSR1O95747 527 aaPredicted RBP11.29□□□□□ -0.6
CHPF2-202ENST00000465601 IGHG3P01860 377 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 ZCCHC18P0CG32 403 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 NPIPA8P0DM63 369 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 ABOP16442 354 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 ATP6V1C1P21283 382 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 TBXA2RP21731 343 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 ELAVL4P26378 380 aaKnown RBP11.29□□□□□ -0.6
CHPF2-202ENST00000465601 KHKP50053 298 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 SRSF1Q07955 248 aaKnown RBP eCLIP11.29□□□□□ -0.62e-6■■□□□ 11.6
CHPF2-202ENST00000465601 PAGE3Q5JUK9 113 aa11.29□□□□□ -0.6
CHPF2-202ENST00000465601 COX20Q5RI15 118 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms