RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 DCAKDQ8WVC6 231 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 EXOSC8Q96B26 276 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 ERP27Q96DN0 273 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 DTNBP1Q96EV8 351 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 VSTM2LQ96N03 204 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 FAM111AQ96PZ2 611 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 C1QTNF3Q9BXJ4 246 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 SLCO5A1Q9H2Y9 848 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 CDC42EP4Q9H3Q1 356 aaKnown RBP8.76□□□□□ -1.01
USP39-212ENST00000465514 MCM8Q9UJA3 840 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 DKKL1Q9UK85 242 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 LAMP3Q9UQV4 416 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 ALPK2Q86TB3 2170 aa8.76□□□□□ -1.01
USP39-212ENST00000465514 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 GNG14A0A1W2PPG7 69 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 C17orf51A8MQB3 221 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 POC1B-GALNT4F8VUJ3 575 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 HS3ST1O14792 307 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 MSTNO14793 375 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 HCRTR2O43614 444 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 PCDH7O60245 1069 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 SMNDC1O75940 238 aaKnown RBP eCLIP8.75□□□□□ -1.01
USP39-212ENST00000465514 PLAUP00749 431 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 KRT6AP02538 564 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 KRT6BP04259 564 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CTAGE8P0CG41 777 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 HSD3B1P14060 373 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 HSD3B2P26439 372 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 IL12BP29460 328 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 UGT2B10P36537 528 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CD79BP40259 229 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 KRT6CP48668 564 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 PNLIPRP2P54317 469 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 B3GALT5-AS1P59052 145 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CLCQ05315 142 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CSTF3Q12996 717 aaKnown RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 RASA2Q15283 850 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 BCL2A1Q16548 175 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 ERCC6LQ2NKX8 1250 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 TMEM249Q2WGJ8 235 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 UNC50Q53HI1 259 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 DNM1P46Q6ZS02 220 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 C22orf34Q6ZV56 151 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CHMP1BQ7LBR1 199 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 P4HA3Q7Z4N8 544 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 SLC44A2Q8IWA5 706 aaPredicted RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 CTAGE4Q8IX94 777 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 UBQLNLQ8IYU4 475 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 ZNF611Q8N823 705 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 CNEP1R1Q8N9A8 125 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 ANKK1Q8NFD2 765 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 OR4N2Q8NGD1 307 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 UHMK1Q8TAS1 419 aaKnown RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 C16orf78Q8WTQ4 265 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 EFHD2Q96C19 240 aaPredicted RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 STARD4Q96DR4 205 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 MTBPQ96DY7 904 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 TRMT61AQ96FX7 289 aaKnown RBP8.75□□□□□ -1.01
USP39-212ENST00000465514 FOLH1BQ9HBA9 442 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 ZNF180Q9UJW8 692 aa8.75□□□□□ -1.01
USP39-212ENST00000465514 SLC22A20A6NK97 555 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 OVOL3O00110 214 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 SCO2O43819 266 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 PLOD3O60568 738 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ULK1O75385 1050 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 SUPT7LO94864 414 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 IGHV4-39P01824 125 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 CRHP06850 196 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ZNF16P17020 682 aaPredicted RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 TAC1P20366 129 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 HMOX2P30519 316 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 CDKN1AP38936 164 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 DSCR4P56555 118 aaPredicted RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 PSPHP78330 225 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 MRPS22P82650 360 aaKnown RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 BTKQ06187 659 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 CKAP4Q07065 602 aaKnown RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 ACSM2AQ08AH3 577 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 FAM174BQ3ZCQ3 159 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ZNF678Q5SXM1 525 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 LIPNQ5VXI9 398 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ACSM2BQ68CK6 577 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 OR2A2Q6IF42 318 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 VWA1Q6PCB0 445 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ZNF474Q6S9Z5 364 aaPredicted RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 GPRIN3Q6ZVF9 776 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 SAMD14Q8IZD0 417 aaPredicted RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 GBP7Q8N8V2 638 aaPredicted RBP8.74□□□□□ -1.01
USP39-212ENST00000465514 OR7G2Q8NG99 324 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 OR4K17Q8NGC6 315 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 METTL6Q8TCB7 284 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 IFT81Q8WYA0 676 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 PGM2Q96G03 612 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 APIPQ96GX9 242 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ZNF382Q96SR6 550 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 ACPTQ9BZG2 426 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 TSPYL1Q9H0U9 437 aa8.74□□□□□ -1.01
USP39-212ENST00000465514 DSN1Q9H410 356 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms