RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 SSX4O60224 188 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SLC2A10O95528 541 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 APBB3O95704 486 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 CELA2BP08218 269 aaPredicted RBP17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 CLEC2LP0C7M8 214 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 PRG2P13727 222 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 CPMP14384 443 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 ETV6P41212 452 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 ADAM15Q13444 863 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 HTR4Q13639 388 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 C1DQ13901 141 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 PIK3R3Q92569 461 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 HPS1Q92902 700 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SLC35B4Q969S0 331 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 NELL2Q99435 816 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SDF2Q99470 211 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 YIPF2Q9BWQ6 316 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 RACGAP1Q9H0H5 632 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SP140LQ9H930 580 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 FBRSQ9HAH7 460 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 TXNL4BQ9NX01 149 aaKnown RBP17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SLC7A7Q9UM01 511 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 SCML1Q9UN30 329 aa17.44■□□□□ 0.38
TSPAN4-210ENST00000464987 COL4A2P08572 1712 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 SMIM30A4D0T7 59 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 DUXAA6NLW8 204 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 H0YGG7 62 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 RGS5O15539 181 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 AQP9O43315 295 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 HCRTR1O43613 425 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 B3GALT2O43825 422 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 FGF17O60258 216 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 DLGAP3O95886 979 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 FUT1P19526 365 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ARF3P61204 181 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 CDC20Q12834 499 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ZMAT1Q5H9K5 638 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 SPANXN2Q5MJ10 180 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 GALNT12Q8IXK2 581 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ZFP41Q8N8Y5 198 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 BBS1Q8NFJ9 593 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 OR9Q1Q8NGQ5 310 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 PIGXQ8TBF5 258 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 GPR151Q8TDV0 419 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ACOT11Q8WXI4 607 aaPredicted RBP17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 PHOX2BQ99453 314 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 TWSG1Q9GZX9 223 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 INIPQ9NRY2 104 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 STARD5Q9NSY2 213 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 KLHL28Q9NXS3 571 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 PHF11Q9UIL8 331 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 PIAS3Q9Y6X2 628 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 LRRC72A6NJI9 287 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 GKN3PP0CG01 181 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 CPEP16870 476 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 MTNR1AP48039 350 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ZNF136P52737 540 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 WNT4P56705 351 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 RPS25P62851 125 aaKnown RBP17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ARHGAP11BQ3KRB8 267 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ZNF628Q5EBL2 1059 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 C22orf42Q6IC83 251 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 Q6ZSR6 202 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 LHFPL3Q86UP9 236 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 LAX1Q8IWV1 398 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 SLC22A18ASQ8N1D0 253 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 POGLUT1Q8NBL1 392 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 OR4F15Q8NGB8 312 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 ASB15Q8WXK1 588 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 KCNE5Q9UJ90 142 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 SSR3Q9UNL2 185 aa17.43■□□□□ 0.38
TSPAN4-210ENST00000464987 A0A075B6Q4 140 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 CDRT1O95170 752 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 IFNGR2P38484 337 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 EIF2B2P49770 351 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 KLHL22Q53GT1 634 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 C3orf38Q5JPI3 329 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 USP53Q70EK8 1073 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 TRIM69Q86WT6 500 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 TRIM48Q8IWZ4 208 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 CEP19Q96LK0 163 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 GAS2L1Q99501 681 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 SLC30A2Q9BRI3 323 aa17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 MTHFD2LQ9H903 347 aaPredicted RBP17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 MRPS18AQ9NVS2 196 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 PAIP2BQ9ULR5 123 aaKnown RBP17.42■□□□□ 0.38
TSPAN4-210ENST00000464987 KDM4EB2RXH2 506 aaPredicted RBP17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 PEX12O00623 359 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 SURF4O15260 269 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 KLF4O43474 513 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 LALBAP00709 142 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 CTSBP07858 339 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 MSL3P1P0C860 447 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 LIMS3P0CW19 117 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 LIMS4P0CW20 117 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 MYL12AP19105 171 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 EEF1A1P68104 462 aaKnown RBP17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 RAB40BQ12829 278 aa17.41■□□□□ 0.38
TSPAN4-210ENST00000464987 DECR1Q16698 335 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms