RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 SLC1A2P43004 574 aa8.29□□□□□ -1.08
APP-213ENST00000464867 HNMTP50135 292 aa8.29□□□□□ -1.08
APP-213ENST00000464867 ARFIP2P53365 341 aa8.29□□□□□ -1.08
APP-213ENST00000464867 NAP1L1P55209 391 aaKnown RBP8.29□□□□□ -1.08
APP-213ENST00000464867 CDH15P55291 814 aa8.29□□□□□ -1.08
APP-213ENST00000464867 CLDN20P56880 219 aa8.29□□□□□ -1.08
APP-213ENST00000464867 BASP1P80723 227 aaKnown RBP8.29□□□□□ -1.08
APP-213ENST00000464867 ITGADQ13349 1161 aa8.29□□□□□ -1.08
APP-213ENST00000464867 GANABQ14697 944 aaKnown RBP8.29□□□□□ -1.08
APP-213ENST00000464867 NKPD1Q17RQ9 610 aa8.29□□□□□ -1.08
APP-213ENST00000464867 PAGE2BQ5JRK9 111 aa8.29□□□□□ -1.08
APP-213ENST00000464867 TMEM201Q5SNT2 666 aa8.29□□□□□ -1.08
APP-213ENST00000464867 ARMC3Q5W041 872 aa8.29□□□□□ -1.08
APP-213ENST00000464867 C18orf63Q68DL7 685 aa8.29□□□□□ -1.08
APP-213ENST00000464867 LRFN4Q6PJG9 635 aa8.29□□□□□ -1.08
APP-213ENST00000464867 KLHL17Q6TDP4 642 aa8.29□□□□□ -1.08
APP-213ENST00000464867 Q6ZSR9 355 aa8.29□□□□□ -1.08
APP-213ENST00000464867 BHLHA15Q7RTS1 189 aaPredicted RBP8.29□□□□□ -1.08
APP-213ENST00000464867 TBC1D1Q86TI0 1168 aaPredicted RBP8.29□□□□□ -1.08
APP-213ENST00000464867 GLCCI1Q86VQ1 547 aa8.29□□□□□ -1.08
APP-213ENST00000464867 GABRG1Q8N1C3 465 aa8.29□□□□□ -1.08
APP-213ENST00000464867 SVOPLQ8N434 492 aa8.29□□□□□ -1.08
APP-213ENST00000464867 ZNF615Q8N8J6 731 aa8.29□□□□□ -1.08
APP-213ENST00000464867 ADCY4Q8NFM4 1077 aa8.29□□□□□ -1.08
APP-213ENST00000464867 OR52B6Q8NGF0 335 aa8.29□□□□□ -1.08
APP-213ENST00000464867 NXNL1Q96CM4 212 aa8.29□□□□□ -1.08
APP-213ENST00000464867 COL21A1Q96P44 957 aa8.29□□□□□ -1.08
APP-213ENST00000464867 CENPKQ9BS16 269 aa8.29□□□□□ -1.08
APP-213ENST00000464867 SUCNR1Q9BXA5 334 aa8.29□□□□□ -1.08
APP-213ENST00000464867 BPESC1Q9GZL8 116 aa8.29□□□□□ -1.08
APP-213ENST00000464867 PTGES2Q9H7Z7 377 aa8.29□□□□□ -1.08
APP-213ENST00000464867 DDX28Q9NUL7 540 aaKnown RBP8.29□□□□□ -1.08
APP-213ENST00000464867 EHD3Q9NZN3 535 aa8.29□□□□□ -1.08
APP-213ENST00000464867 PPP4R1LQ9P1A2 415 aa8.29□□□□□ -1.08
APP-213ENST00000464867 IKZF3Q9UKT9 509 aa8.29□□□□□ -1.08
APP-213ENST00000464867 GRIP1Q9Y3R0 1128 aa8.29□□□□□ -1.08
APP-213ENST00000464867 AP4B1Q9Y6B7 739 aa8.29□□□□□ -1.08
APP-213ENST00000464867 NPIPA5A0A0B4J1W7 369 aa8.28□□□□□ -1.08
APP-213ENST00000464867 MAGEB16A2A368 324 aa8.28□□□□□ -1.08
APP-213ENST00000464867 OR2M5A3KFT3 312 aa8.28□□□□□ -1.08
APP-213ENST00000464867 OR6C70A6NIJ9 312 aa8.28□□□□□ -1.08
APP-213ENST00000464867 NPIPA7E9PJI5 369 aa8.28□□□□□ -1.08
APP-213ENST00000464867 REM1O75628 298 aa8.28□□□□□ -1.08
APP-213ENST00000464867 HAUS5O94927 633 aa8.28□□□□□ -1.08
APP-213ENST00000464867 SCELO95171 688 aa8.28□□□□□ -1.08
APP-213ENST00000464867 TBX6O95947 436 aaPredicted RBP8.28□□□□□ -1.08
APP-213ENST00000464867 BCL10O95999 233 aa8.28□□□□□ -1.08
APP-213ENST00000464867 TPM1P09493 284 aa8.28□□□□□ -1.08
APP-213ENST00000464867 PABPC4LP0CB38 370 aaKnown RBP8.28□□□□□ -1.08
APP-213ENST00000464867 NPIPA8P0DM63 369 aa8.28□□□□□ -1.08
APP-213ENST00000464867 HKR1P10072 659 aa8.28□□□□□ -1.08
APP-213ENST00000464867 GPX3P22352 226 aa8.28□□□□□ -1.08
APP-213ENST00000464867 PTAFRP25105 342 aa8.28□□□□□ -1.08
APP-213ENST00000464867 KRT20P35900 424 aa8.28□□□□□ -1.08
APP-213ENST00000464867 MAGEA1P43355 309 aa8.28□□□□□ -1.08
APP-213ENST00000464867 SLC6A8P48029 635 aa8.28□□□□□ -1.08
APP-213ENST00000464867 SARNPP82979 210 aaKnown RBP8.28□□□□□ -1.08
APP-213ENST00000464867 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.28□□□□□ -1.08
APP-213ENST00000464867 OR4C11Q6IEV9 310 aa8.28□□□□□ -1.08
APP-213ENST00000464867 ZNF669Q96BR6 464 aaPredicted RBP8.28□□□□□ -1.08
APP-213ENST00000464867 REXO5Q96IC2 774 aaKnown RBP8.28□□□□□ -1.08
APP-213ENST00000464867 DNAJC7Q99615 494 aa8.28□□□□□ -1.08
APP-213ENST00000464867 CHP1Q99653 195 aa8.28□□□□□ -1.08
APP-213ENST00000464867 DDX47Q9H0S4 455 aaKnown RBP8.28□□□□□ -1.08
APP-213ENST00000464867 EHD1Q9H4M9 534 aa8.28□□□□□ -1.08
APP-213ENST00000464867 MYNNQ9NPC7 610 aa8.28□□□□□ -1.08
APP-213ENST00000464867 SDHAF3Q9NRP4 125 aa8.28□□□□□ -1.08
APP-213ENST00000464867 BCAP29Q9UHQ4 241 aa8.28□□□□□ -1.08
APP-213ENST00000464867 FBXO5Q9UKT4 447 aa8.28□□□□□ -1.08
APP-213ENST00000464867 ARFGEF3Q5TH69 2177 aa8.28□□□□□ -1.08
APP-213ENST00000464867 GLOD5A6NK44 160 aa8.27□□□□□ -1.09
APP-213ENST00000464867 B4DSR2 109 aa8.27□□□□□ -1.09
APP-213ENST00000464867 AKR1B15C9JRZ8 316 aaPredicted RBP8.27□□□□□ -1.09
APP-213ENST00000464867 ETS1P14921 441 aa8.27□□□□□ -1.09
APP-213ENST00000464867 NT5EP21589 574 aa8.27□□□□□ -1.09
APP-213ENST00000464867 PIK3R1P27986 724 aa8.27□□□□□ -1.09
APP-213ENST00000464867 AGTR1P30556 359 aa8.27□□□□□ -1.09
APP-213ENST00000464867 APOBEC3AP31941 199 aaPredicted RBP8.27□□□□□ -1.09
APP-213ENST00000464867 RAP1GDS1P52306 607 aa8.27□□□□□ -1.09
APP-213ENST00000464867 PHC1P78364 1004 aa8.27□□□□□ -1.09
APP-213ENST00000464867 LAPTM5Q13571 262 aa8.27□□□□□ -1.09
APP-213ENST00000464867 EFR3AQ14156 821 aa8.27□□□□□ -1.09
APP-213ENST00000464867 C4orf22Q6V702 233 aa8.27□□□□□ -1.09
APP-213ENST00000464867 P2RY8Q86VZ1 359 aa8.27□□□□□ -1.09
APP-213ENST00000464867 SPATA6LQ8N4H0 392 aa8.27□□□□□ -1.09
APP-213ENST00000464867 UBL4BQ8N7F7 174 aa8.27□□□□□ -1.09
APP-213ENST00000464867 OR5M1Q8NGP8 315 aa8.27□□□□□ -1.09
APP-213ENST00000464867 ATG4AQ8WYN0 398 aa8.27□□□□□ -1.09
APP-213ENST00000464867 MTBPQ96DY7 904 aa8.27□□□□□ -1.09
APP-213ENST00000464867 PTCD3Q96EY7 689 aaKnown RBP8.27□□□□□ -1.09
APP-213ENST00000464867 SERPINB12Q96P63 405 aa8.27□□□□□ -1.09
APP-213ENST00000464867 SNX18Q96RF0 628 aa8.27□□□□□ -1.09
APP-213ENST00000464867 HBEGFQ99075 208 aa8.27□□□□□ -1.09
APP-213ENST00000464867 INPP5KQ9BT40 448 aa8.27□□□□□ -1.09
APP-213ENST00000464867 EFCAB11Q9BUY7 163 aa8.27□□□□□ -1.09
APP-213ENST00000464867 FRMD8P1Q9BZ68 369 aaPredicted RBP8.27□□□□□ -1.09
APP-213ENST00000464867 CDC42EP4Q9H3Q1 356 aaKnown RBP8.27□□□□□ -1.09
APP-213ENST00000464867 DSN1Q9H410 356 aa8.27□□□□□ -1.09
APP-213ENST00000464867 UNKLQ9H9P5 680 aaKnown RBP8.27□□□□□ -1.09
APP-213ENST00000464867 SMYD2Q9NRG4 433 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms