RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 A0A0G2JK05 382 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CIB4A0PJX0 185 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SLC9A3R1O14745 358 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 KLF4O43474 513 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 GSTZ1O43708 216 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 TSPAN9O75954 239 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 UBL3O95164 117 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TBX6O95947 436 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 CHRM4P08173 479 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 HOXD4P09016 255 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 H2AFB2P0C5Z0 115 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 GNSP15586 552 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CTGFP29279 349 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 WEE1P30291 646 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 MMP15P51511 669 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ARFIP1P53367 373 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 EPHB3P54753 998 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TAS2R41P59536 307 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TRA2BP62995 288 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 SLC7A9P82251 487 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DHODHQ02127 395 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 FUT5Q11128 374 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DYRK1AQ13627 763 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SLC22A10Q63ZE4 541 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TXNDC8Q6A555 127 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 KIAA1161Q6NSJ0 714 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 FAM180BQ6P0A1 224 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 LYPD4Q6UWN0 246 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SEZ6L2Q6UXD5 910 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 Q6ZVU0 165 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 PLEKHM3Q6ZWE6 761 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 KRT74Q7RTS7 529 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 C16orf62Q7Z3J2 963 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 NRSN1Q8IZ57 195 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TOMM5Q8N4H5 51 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 OR56B4Q8NH76 319 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 HAVCR2Q8TDQ0 301 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 XAGE5Q8WWM1 108 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DIO2Q92813 273 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 YIPF5Q969M3 257 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 EXOSC8Q96B26 276 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 WBP1Q96G27 269 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ERMAPQ96PL5 475 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 ABHD1Q96SE0 405 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 VN1R3Q9BXE9 311 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CACNG6Q9BXT2 260 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 B3GNT4Q9C0J1 378 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TMEM168Q9H0V1 697 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ABCG4Q9H172 646 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DDX31Q9H8H2 851 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 TRIM36Q9NQ86 728 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 INPP5EQ9NRR6 644 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 IL20Q9NYY1 176 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 RABL2AQ9UBK7 228 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 RABL2BQ9UNT1 228 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 OBSL1O75147 1896 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 A0A1W2PPL8 197 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 hCG_1807616A0A1W2PRN6 198 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 MANSC4A6NHS7 340 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 G3V3Q6 166 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 M0R233 179 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ZNF593O00488 134 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 DVL2O14641 736 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CTDSPLO15194 276 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 HYAL3O43820 417 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 PRAF2O60831 178 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 LILRB5O75023 590 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 FZD7O75084 574 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ITGA10O75578 1167 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SERPINI2O75830 405 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 FGBP02675 491 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SERPIND1P05546 499 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DRD2P14416 443 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TIMP2P16035 220 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 IL32P24001 234 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 GIFP27352 417 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ATP6V1E1P36543 226 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 BUD31P41223 144 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 RECQLP46063 649 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 CAPZA2P47755 286 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 EPHA5P54756 1037 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 TAS2R43P59537 309 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ST3GAL3Q11203 375 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 DECR1Q16698 335 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ST3GAL2Q16842 350 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CLEC12AQ5QGZ9 265 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 GARNL3Q5VVW2 1013 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SLC30A6Q6NXT4 461 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 IL20RBQ6UXL0 311 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 B3GLCTQ6Y288 498 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ZNF620Q6ZNG0 422 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 NUDT13Q86X67 352 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SIAH3Q8IW03 269 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 CRIPAKQ8N1N5 446 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 ACBD7Q8N6N7 88 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SIRT6Q8N6T7 355 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 TEX19Q8NA77 164 aa6.83□□□□□ -1.32
USP48-206ENST00000464577 SRFBP1Q8NEF9 429 aaKnown RBP6.83□□□□□ -1.32
USP48-206ENST00000464577 BBS1Q8NFJ9 593 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms