RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 NCF1P14598 390 aaPredicted RBP2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 MAGEA9P43362 315 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 RPS6P62753 249 aaKnown RBP2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 PUDPQ08623 228 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 TRIP10Q15642 601 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 CAMK4Q16566 473 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 Q1RN00 199 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 LCE1EQ5T753 118 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 RIPPLY2Q5TAB7 128 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 SCYL2Q6P3W7 929 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 SLC39A4Q6P5W5 647 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 CCBE1Q6UXH8 406 aaPredicted RBP2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 CCDC73Q6ZRK6 1079 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 LRRC70Q7Z2Q7 622 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 MARCH9Q86YJ5 346 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 CBWD2Q8IUF1 395 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 TEX9Q8N6V9 391 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 STKLD1Q8NE28 680 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 FEM1AQ9BSK4 669 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 THUMPD2Q9BTF0 503 aaKnown RBP2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 HCAR1Q9BXC0 346 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 LIN28AQ9H9Z2 209 aaKnown RBP2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 AGPAT5Q9NUQ2 364 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 ELOVL2Q9NXB9 296 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 RSPH14Q9UHP6 348 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 RNF6Q9Y252 685 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 AP4B1Q9Y6B7 739 aa2.84□□□□□ -1.95
HMGXB4-205ENST00000464480 UNC13AQ9UPW8 1703 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 G3V3Y1 287 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 K7EPI3 171 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 SAP18O00422 153 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 MAPK13O15264 365 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 JAK2O60674 1132 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 STX11O75558 287 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 IDH1O75874 414 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 MFN2O95140 757 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 JCHAINP01591 159 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 TPM3P06753 285 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ALPIP09923 528 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ANXA3P12429 323 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 BCKDHAP12694 445 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 HPDP32754 393 aaPredicted RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 CYLC1P35663 651 aaPredicted RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ACVR1BP36896 505 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ACAA2P42765 397 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ALDH3B2P48448 385 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 CD151P48509 253 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 TDO2P48775 406 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 DSCR10P59022 87 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 SARNPP82979 210 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 PLOD1Q02809 727 aaPredicted RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 IL18R1Q13478 541 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 TIMM50Q3ZCQ8 353 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 OLFML2AQ68BL7 652 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ZNF774Q6NX45 483 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 BAIAP2L2Q6UXY1 529 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 GCNT7Q6ZNI0 430 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 LHFPL4Q7Z7J7 247 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 ZNF573Q86YE8 665 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 UNC5CLQ8IV45 518 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 FADS6Q8N9I5 356 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 SDSLQ96GA7 329 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 AKR1E2Q96JD6 320 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 MRPL13Q9BYD1 178 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 COMMD4Q9H0A8 199 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 SLC25A51Q9H1U9 297 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 OPN3Q9H1Y3 402 aaPredicted RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 COQ10BQ9H8M1 238 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 FARSBQ9NSD9 589 aaKnown RBP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 B9D1Q9UPM9 204 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 MFHAS1Q9Y4C4 1052 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 HCFC1P51610 2035 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 CUX2O14529 1486 aa2.83□□□□□ -1.96
HMGXB4-205ENST00000464480 CCT8L1PA6NM43 557 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 A8MX80 341 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 CLDN5O00501 218 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 NDC80O14777 642 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 GPAA1O43292 621 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 SMPD2O60906 423 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 GUCA1CO95843 209 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 CSF2P04141 144 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 LAMP1P11279 417 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 PGAM2P15259 253 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 IDSP22304 550 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 PSMA2P25787 234 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 HTR2AP28223 471 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 XCR1P46094 333 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 OR1D4P47884 311 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 TAF6P49848 677 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 CSRP3P50461 194 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 PAX2Q02962 417 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 TRDNQ13061 729 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 CYP51A1Q16850 503 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 TPD52L1Q16890 204 aaPredicted RBP2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 SLC25A30Q5SVS4 291 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 DCST2Q5T1A1 773 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 ATAD3CQ5T2N8 411 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 CBLN3Q6UW01 205 aa2.82□□□□□ -1.96
HMGXB4-205ENST00000464480 C2orf66Q6UXQ4 117 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms