RNA–Protein interactions for RNA: ENST00000463684.1

SMC1A-204, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 2

Gene SMC1A, Length 880 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-204ENST00000463684 IRF9Q00978 393 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 GALNT1Q10472 559 aaPredicted RBP12.94□□□□□ -0.34
SMC1A-204ENST00000463684 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.94□□□□□ -0.34
SMC1A-204ENST00000463684 KRTAP24-1Q3LI83 254 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 ZNF672Q499Z4 452 aaPredicted RBP12.94□□□□□ -0.34
SMC1A-204ENST00000463684 SH2D4BQ5SQS7 431 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 NCMAPQ5T1S8 102 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 C6orf52Q5T4I8 152 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 LGSNQ5TDP6 509 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 GTF2IRD2BQ6EKJ0 949 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 DNM1P46Q6ZS02 220 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 GTF2IRD2Q86UP8 949 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 CENPLQ8N0S6 344 aaPredicted RBP12.94□□□□□ -0.34
SMC1A-204ENST00000463684 OR9A2Q8NGT5 310 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 MTBPQ96DY7 904 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 SENP1Q9P0U3 644 aa12.94□□□□□ -0.34
SMC1A-204ENST00000463684 GPRIN2O60269 458 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 C2P06681 752 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 CALCOCO2Q13137 446 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 CYP27C1Q4G0S4 372 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 GGNQ86UU5 652 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 WDR75Q8IWA0 830 aaKnown RBP12.93□□□□□ -0.34
SMC1A-204ENST00000463684 PTGR2Q8N8N7 351 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-204ENST00000463684 HSD17B8Q92506 261 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 S100PBPQ96BU1 408 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 PHF21BQ96EK2 531 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 C11orf24Q96F05 449 aaPredicted RBP12.93□□□□□ -0.34
SMC1A-204ENST00000463684 C12orf49Q9H741 205 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 BRF2Q9HAW0 419 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 LRTM1Q9HBL6 345 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 FARSBQ9NSD9 589 aaKnown RBP12.93□□□□□ -0.34
SMC1A-204ENST00000463684 GIMAP4Q9NUV9 329 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 LPAR3Q9UBY5 353 aa12.93□□□□□ -0.34
SMC1A-204ENST00000463684 MRTO4Q9UKD2 239 aaKnown RBP12.93□□□□□ -0.34
SMC1A-204ENST00000463684 SSX4O60224 188 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 GMFGO60234 142 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 DLX3O60479 287 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 PLOD3O60568 738 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 NDUFS7O75251 213 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 KLHL2O95198 593 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 PDYNP01213 254 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 TUBBP07437 444 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 PYGBP11216 843 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 IL32P24001 234 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 MPIP34949 423 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 ZNF844Q08AG5 666 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 C17orf67Q0P5P2 114 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 ZNF155Q12901 538 aaPredicted RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 NRF1Q16656 503 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 DECR1Q16698 335 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 MROH9Q5TGP6 573 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 MARCH3Q86UD3 253 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 EXOC3L1Q86VI1 746 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 C1orf52Q8N6N3 182 aaKnown RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 OR10D3Q8NH80 312 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 SELENOMQ8WWX9 145 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 NEUROG1Q92886 237 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 EXOSC8Q96B26 276 aaKnown RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 C19orf24Q9BVV8 132 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 FAIMQ9NVQ4 179 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 TMEM160Q9NX00 188 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 FAM120CQ9NX05 1096 aaKnown RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 XPR1Q9UBH6 696 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 GDF2Q9UK05 429 aaPredicted RBP12.92□□□□□ -0.34
SMC1A-204ENST00000463684 SNX6Q9UNH7 406 aa12.92□□□□□ -0.34
SMC1A-204ENST00000463684 ROS1P08922 2347 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 SHISA8B8ZZ34 492 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 CCDC188H7C350 402 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 CXCL13O43927 109 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 COQ9O75208 318 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 THBS1P07996 1170 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 ADH6P28332 368 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 STX2P32856 288 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 PSMD4P55036 377 aaKnown RBP12.91□□□□□ -0.34
SMC1A-204ENST00000463684 DSCR9P59020 149 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 PSG6Q00889 435 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TRAF3Q13114 568 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 NAB1Q13506 487 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TMEM249Q2WGJ8 235 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 PGGHGQ32M88 737 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 GGTA1PQ4G0N0 100 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 PDSS1Q5T2R2 415 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 FIGNL1Q6PIW4 674 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 FAM9CQ8IZT9 166 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 OR7G2Q8NG99 324 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 OR4F6Q8NGB9 312 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 FBF1Q8TES7 1133 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TNFRSF13CQ96RJ3 184 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 USB1Q9BQ65 265 aaKnown RBP12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TRAF4Q9BUZ4 470 aaPredicted RBP12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TBL1XR1Q9BZK7 514 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 RTN4RQ9BZR6 473 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 SHARPINQ9H0F6 387 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 FBXO34Q9NWN3 711 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 FLRT3Q9NZU0 649 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 VPS29Q9UBQ0 182 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 PCTPQ9UKL6 214 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 TMCO1Q9UM00 188 aa12.91□□□□□ -0.34
SMC1A-204ENST00000463684 VDAC3Q9Y277 283 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms