RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 C17orf51A8MQB3 221 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 SCO2O43819 266 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 NGFRP08138 427 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 ALDH3A1P30838 453 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 ASMTP46597 345 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 CLK3P49761 638 aaKnown RBP18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 PRR5P85299 388 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 OCRLQ01968 901 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 VPS26BQ4G0F5 336 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 ZNF385BQ569K4 471 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 EXOSC6Q5RKV6 272 aaKnown RBP18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 CDRT4Q8N9R6 151 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 PPCDCQ96CD2 204 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 GIMAP5Q96F15 307 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 FOXC2Q99958 501 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 GPATCH1Q9BRR8 931 aaKnown RBP18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 PTGES2Q9H7Z7 377 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 FLRT3Q9NZU0 649 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 TRAF6Q9Y4K3 522 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 MED13LQ71F56 2210 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 MED12LQ86YW9 2145 aa18.58■□□□□ 0.56
PDLIM4-205ENST00000463615 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 TLDC2A0PJX2 215 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 EEF1E1-BLOC1S5C9J1V9 151 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 EEF1E1O43324 174 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 TNFSF13O75888 250 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 KCNH1O95259 989 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 CHRNGP07510 517 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 LINC00032P0C843 101 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 GABRA3P34903 492 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 SERPINB5P36952 375 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 AGFG1P52594 562 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 RPL38P63173 70 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 HSPB3Q12988 150 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 MLC1Q15049 377 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 ARL13AQ5H913 290 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 ZCCHC12Q6PEW1 402 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 LRIG3Q6UXM1 1119 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 OR2W6PQ8NHA6 318 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 FAM110BQ8TC76 370 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 TWIST2Q8WVJ9 160 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 GFM2Q969S9 779 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 CIDECQ96AQ7 238 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 C1GALT1C1Q96EU7 318 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 TSSK3Q96PN8 268 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 FAM111AQ96PZ2 611 aa18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 EML4Q9HC35 981 aaKnown RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 RPH3AQ9Y2J0 694 aaPredicted RBP18.57■□□□□ 0.56
PDLIM4-205ENST00000463615 MPDZO75970 2070 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 MTORP42345 2549 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 ABCA4P78363 2273 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 UTS2O95399 124 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 BCKDHAP12694 445 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 DDX5P17844 614 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 LCN1P31025 176 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 ART1P52961 327 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 IST1P53990 364 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 CLDN15P56746 228 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 EEFSECP57772 596 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 VSNL1P62760 191 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 C17orf67Q0P5P2 114 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 TMEM44Q2T9K0 475 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 XKR7Q5GH72 579 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 OR2A2Q6IF42 318 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 R3HCC1LQ7Z5L2 792 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 CDC20BQ86Y33 519 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 GRAMD2AQ8IUY3 354 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 OR6Y1Q8NGX8 325 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 AENQ8WTP8 325 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 DUSP19Q8WTR2 217 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 NRGNQ92686 78 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 INTS12Q96CB8 462 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 MS4A4EQ96PG1 132 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 RBM24Q9BX46 236 aaKnown RBP18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 MED11Q9P086 117 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 ATP6V1HQ9UI12 483 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 ST6GALNAC2Q9UJ37 374 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 PACSIN3Q9UKS6 424 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 EDARQ9UNE0 448 aa18.56■□□□□ 0.56
PDLIM4-205ENST00000463615 GXYLT2A0PJZ3 443 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 A8MXE2 369 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 ALG1L2C9J202 215 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 TNFRSF21O75509 655 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 TGM6O95932 706 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 IGKV1D-16P01601 117 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 HK1P19367 917 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 GPC1P35052 558 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 MANFP55145 182 aaKnown RBP18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 ANKRD26P1Q6NSI1 321 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 EMBQ6PCB8 327 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 APOOLQ6UXV4 268 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 MARCH3Q86UD3 253 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 MEIOBQ8N635 442 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 NUP43Q8NFH3 380 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 PPP3R2Q96LZ3 170 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 DACH2Q96NX9 599 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 PIGQQ9BRB3 760 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 TMEM109Q9BVC6 243 aa18.55■□□□□ 0.56
PDLIM4-205ENST00000463615 SH3BP4Q9P0V3 963 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms