RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 UQCRC2P22695 453 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 ELAVL4P26378 380 aaKnown RBP16.13■□□□□ 0.17
VPS52-214ENST00000463486 EVI2BP34910 448 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 PTGS2P35354 604 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 RPS26P62854 115 aaKnown RBP16.13■□□□□ 0.17
VPS52-214ENST00000463486 GUCY1A3Q02108 690 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 RBPJQ06330 500 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 SPDYE7PQ495Y7 208 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 SAXO2Q658L1 398 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 CGB2Q6NT52 195 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 FIGNL1Q6PIW4 674 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 GALNT10Q86SR1 603 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 MIER2Q8N344 545 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 ARFGAP2Q8N6H7 521 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 VPS37AQ8NEZ2 397 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 FAM57AQ8TBR7 257 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 THOC1Q96FV9 657 aaKnown RBP16.13■□□□□ 0.17
VPS52-214ENST00000463486 PSMG3-AS1Q96PY0 264 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 OR52E6Q96RD3 313 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 CCDC134Q9H6E4 229 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 SPRR3Q9UBC9 169 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 ABCG2Q9UNQ0 655 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 WIF1Q9Y5W5 379 aa16.13■□□□□ 0.17
VPS52-214ENST00000463486 MED12Q93074 2177 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 TRGV8A0A0C4DH27 118 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 RNF103-CHMP3A0A140T963 221 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 AQP7O14520 342 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 AGFG2O95081 481 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 NGFRP08138 427 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 GRAMD1BQ3KR37 738 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 HSP90B2PQ58FF3 399 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 CCNJQ5T5M9 372 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 AP1ARQ63HQ0 302 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 PLCZ1Q86YW0 608 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 COX18Q8N8Q8 333 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 OR5D16Q8NGK9 328 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 OR1J4Q8NGS1 313 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 NEURL3Q96EH8 262 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 PHF12Q96QT6 1004 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 OR7D2Q96RA2 312 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 ZBTB18Q99592 522 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 SLC6A15Q9H2J7 730 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 ZNF385DQ9H6B1 395 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 FBXL2Q9UKC9 423 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 MRTO4Q9UKD2 239 aaKnown RBP16.12■□□□□ 0.17
VPS52-214ENST00000463486 PCDHGB4Q9UN71 923 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 FAF1Q9UNN5 650 aaPredicted RBP16.12■□□□□ 0.17
VPS52-214ENST00000463486 ICE1Q9Y2F5 2266 aa16.12■□□□□ 0.17
VPS52-214ENST00000463486 NBPF19A0A087WUL8 3843 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 A0A1B0GUH1 482 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 FAM234BA2RU67 622 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 CCDC154A6NI56 674 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 NPIPB9F8W1W9 429 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 CBR3O75828 277 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 TBXA2RP21731 343 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 GDF1P27539 372 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 SOAT1P35610 550 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 MASP1P48740 699 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 POLR2JP52435 117 aaKnown RBP16.11■□□□□ 0.17
VPS52-214ENST00000463486 PSMD4P55036 377 aaKnown RBP16.11■□□□□ 0.17
VPS52-214ENST00000463486 POU6F2P78424 691 aaPredicted RBP16.11■□□□□ 0.17
VPS52-214ENST00000463486 OR5M10Q6IEU7 315 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 BHLHB9Q6PI77 547 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 MARCH3Q86UD3 253 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 FJX1Q86VR8 437 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 FADS6Q8N9I5 356 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 NEIL3Q8TAT5 605 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 ADAMTS15Q8TE58 950 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 SSC4DQ8WTU2 575 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 JADE3Q92613 823 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 VPS33AQ96AX1 596 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 NPHS2Q9NP85 383 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 TNFRSF10DQ9UBN6 386 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 B4GALT7Q9UBV7 327 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 DCTN4Q9UJW0 460 aa16.11■□□□□ 0.17
VPS52-214ENST00000463486 CENPEQ02224 2701 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 IGLV3-32A0A0A0MS00 114 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 TRGV5A0A0B4J1U4 118 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 PRAMEF27A3QJZ7 478 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 OR14I1A6ND48 311 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 ALG1L2C9J202 215 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 ZIC3O60481 467 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 SOX30O94993 753 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 GSNP06396 782 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 KRT16P08779 473 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 ABOP16442 354 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 HOXB9P17482 250 aaPredicted RBP16.1■□□□□ 0.17
VPS52-214ENST00000463486 MATN1P21941 496 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 LCN1P31025 176 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 RFX3P48380 749 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 TRPC1P48995 793 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 ATP4BP51164 291 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 MVDP53602 400 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 CASP9P55211 416 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 LRRC74AQ0VAA2 488 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 GXYLT1Q4G148 440 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 EIPR1Q53HC9 387 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 HEPHL1Q6MZM0 1159 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 BLOC1S3Q6QNY0 202 aa16.1■□□□□ 0.17
VPS52-214ENST00000463486 MSANTD1Q6ZTZ1 278 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms