RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 ZNF550Q7Z398 422 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 MARCH3Q86UD3 253 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 OR2L13Q8N349 312 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.5□□□□□ -0.09
COL7A1-204ENST00000462475 C1GALT1C1Q96EU7 318 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 HS3ST6Q96QI5 342 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 PIGQQ9BRB3 760 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 RNF122Q9H9V4 155 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 MIEF1Q9NQG6 463 aa14.5□□□□□ -0.09
COL7A1-204ENST00000462475 DDX18Q9NVP1 670 aaKnown RBP14.5□□□□□ -0.09
COL7A1-204ENST00000462475 FAM120CQ9NX05 1096 aaKnown RBP14.5□□□□□ -0.09
COL7A1-204ENST00000462475 CCDC151A5D8V7 595 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 SHISA8B8ZZ34 492 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 EMC8O43402 210 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 TNFRSF21O75509 655 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 SLITRK5O94991 958 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 IL33O95760 270 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 POU2F1P14859 743 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 NTSP30990 170 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 EEFSECP57772 596 aaKnown RBP14.49□□□□□ -0.09
COL7A1-204ENST00000462475 PON3Q15166 354 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 P3H2Q8IVL5 708 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 CCNYL1Q8N7R7 359 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 DUSP19Q8WTR2 217 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 MARK4Q96L34 752 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 AMDHD1Q96NU7 426 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 PIP5K1AQ99755 562 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 LMF2Q9BU23 707 aaKnown RBP14.49□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF395Q9H8N7 513 aaPredicted RBP14.49□□□□□ -0.09
COL7A1-204ENST00000462475 UBTD1Q9HAC8 227 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 Q9N2J8 555 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 MYNNQ9NPC7 610 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 SDHAF3Q9NRP4 125 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF226Q9NYT6 803 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 TAS2R7Q9NYW3 318 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 EMCNQ9ULC0 261 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 GRID1Q9ULK0 1009 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF175Q9Y473 711 aa14.49□□□□□ -0.09
COL7A1-204ENST00000462475 FN1P02751 2386 aaKnown RBP14.49□□□□□ -0.09
COL7A1-204ENST00000462475 GXYLT2A0PJZ3 443 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ARHGEF9O43307 516 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 RIPK2O43353 540 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 GMFGO60234 142 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 SMPD2O60906 423 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 CD8BP10966 210 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 PYGBP11216 843 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 LOXP28300 417 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-204ENST00000462475 KCNJ5P48544 419 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 GUSBP1Q15486 140 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 IMPG1Q17R60 797 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 GLE1Q53GS7 698 aaKnown RBP14.48□□□□□ -0.09
COL7A1-204ENST00000462475 C22orf34Q6ZV56 151 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 LRRC75A-AS1Q8N1F1 130 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 CIARTQ8N365 385 aaPredicted RBP14.48□□□□□ -0.09
COL7A1-204ENST00000462475 METTL25Q8N6Q8 603 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ZNF610Q8N9Z0 462 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 MNS1Q8NEH6 495 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ACMSDQ8TDX5 336 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 MZB1Q8WU39 189 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ELP4Q96EB1 424 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ZC3HAV1LQ96H79 300 aaKnown RBP14.48□□□□□ -0.09
COL7A1-204ENST00000462475 COX4I2Q96KJ9 171 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 PTGES2Q9H7Z7 377 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 TNFRSF12AQ9NP84 129 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 ELOVL5Q9NYP7 299 aa14.48□□□□□ -0.09
COL7A1-204ENST00000462475 G3V2L1 256 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 C16orf97H3BN30 126 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 LINC01387J3KSC0 135 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 RSL1D1O76021 490 aaKnown RBP14.47□□□□□ -0.09
COL7A1-204ENST00000462475 AQP8O94778 261 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 UTS2O95399 124 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 IGKV1D-16P01601 117 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 HEXAP06865 529 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 GSTA1P08263 222 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 ZNHIT3Q15649 155 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-204ENST00000462475 ACKR1Q16570 336 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 TMEM44Q2T9K0 475 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 GRAMD1BQ3KR37 738 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 APOOLQ6UXV4 268 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 TRMT10CQ7L0Y3 403 aaKnown RBP14.47□□□□□ -0.09
COL7A1-204ENST00000462475 GGNQ86UU5 652 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 PIGTQ969N2 578 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 ARSGQ96EG1 525 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 Q96MF0 132 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 CCL19Q99731 98 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 SLC39A3Q9BRY0 314 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 TBL1XR1Q9BZK7 514 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 EQTNQ9NQ60 294 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 PSMC3IPQ9P2W1 217 aaPredicted RBP14.47□□□□□ -0.09
COL7A1-204ENST00000462475 PROCRQ9UNN8 238 aa14.47□□□□□ -0.09
COL7A1-204ENST00000462475 IGLV3-32A0A0A0MS00 114 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 H7C1Q1 480 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 ANGPTL1O95841 491 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 LY6G6DO95868 133 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 GABRA3P34903 492 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 SLC6A8P48029 635 aa14.46□□□□□ -0.09
COL7A1-204ENST00000462475 CLK3P49761 638 aaKnown RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 PSMD4P55036 377 aaKnown RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 RPS3AP61247 264 aaKnown RBP14.46□□□□□ -0.09
COL7A1-204ENST00000462475 ANKRD34AQ69YU3 496 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms