RNA–Protein interactions for RNA: ENST00000462198.5

SMARCC1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 785 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-204ENST00000462198 PKD1L1Q8TDX9 2849 aa5.58□□□□□ -1.52
SMARCC1-204ENST00000462198 SONP18583 2426 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 OR2A25A4D2G3 310 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 A8MT66 165 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 C9J4A7 227 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 INAFM1C9JVW0 142 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 OR1F1O43749 312 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 NRP2O60462 931 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CTSVO60911 334 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 OR2B3O76000 313 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 KLHL18O94889 574 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 OR6B1O95007 311 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 SIX3O95343 332 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CRYABP02511 175 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 SBK3P0C264 359 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CDH1P12830 882 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 IGFBP2P18065 325 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 AGXTP21549 392 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 BGNP21810 368 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ATP5F1P24539 256 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CXCR2P25025 360 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PTX3P26022 381 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 EEF1DP29692 281 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 FOLR3P41439 243 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 SLC6A12P48065 614 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PIK3CGP48736 1102 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ENTPD1P49961 510 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 AQP4P55087 323 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 VSX2P58304 361 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 HERVK_113P63132 956 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 RPP38P78345 283 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 IRF8Q02556 426 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF33BQ06732 778 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 LRRC74AQ0VAA2 488 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 BST1Q10588 318 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 BAMBIQ13145 260 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 GTF2H2Q13888 395 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 SF3B4Q15427 424 aaKnown RBP eCLIP5.57□□□□□ -1.527e-8■■■■□ 25
SMARCC1-204ENST00000462198 SMU1Q2TAY7 513 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 DEFB110Q30KQ9 67 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 KCTD21Q4G0X4 260 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 XKR6Q5GH73 641 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CATSPEREQ5SY80 951 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 IRAK1BP1Q5VVH5 260 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF425Q6IV72 752 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 GTF2H2CQ6P1K8 395 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 FDX2Q6P4F2 183 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ISLR2Q6UXK2 745 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ZYG11AQ6WRX3 759 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 RHOUQ7L0Q8 258 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PPP1R32Q7Z5V6 425 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CAMKMTQ7Z624 323 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PAQR7Q86WK9 346 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 SLC22A9Q8IVM8 553 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 KLHDC8AQ8IYD2 350 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 GPR135Q8IZ08 494 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 FAM109AQ8N4B1 249 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 DNAJC22Q8N4W6 341 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ZNF610Q8N9Z0 462 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ABHD11Q8NFV4 315 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 UBTD2Q8WUN7 234 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 S100ZQ8WXG8 99 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ATP6V1E2Q96A05 226 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 TBC1D20Q96BZ9 403 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PHF21BQ96EK2 531 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 RMND5BQ96G75 393 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CLPTM1LQ96KA5 538 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 AIF1LQ9BQI0 150 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ERVK-6Q9BXR3 956 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 POLDIP3Q9BY77 421 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 WDR12Q9GZL7 423 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CHRNA10Q9GZZ6 450 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PAIP1Q9H074 479 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 C12orf65Q9H3J6 166 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 PELI2Q9HAT8 420 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 FANCFQ9NPI8 374 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ZC4H2Q9NQZ6 224 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 GPRC5BQ9NZH0 403 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 NPAP1Q9NZP6 1156 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ARMCX1Q9P291 453 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ABI3Q9P2A4 366 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 MID2Q9UJV3 735 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 EMCNQ9ULC0 261 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 POMPQ9Y244 141 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 ASB1Q9Y576 335 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 KLK4Q9Y5K2 254 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 NUP210LQ5VU65 1888 aa5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 CHD3Q12873 2000 aaKnown RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 HRNRQ86YZ3 2850 aaPredicted RBP5.57□□□□□ -1.52
SMARCC1-204ENST00000462198 TGP01266 2768 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 TRAV6A0A075B6T7 132 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 KCNE1BA0A087WTH5 132 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 LOC105369274A0A096LPK9 316 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 IGKV1-8A0A0C4DH67 115 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 LOC102723532A0A0G2JNH3 316 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 TRBC2A0A5B9 178 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 SHISA3A0PJX4 238 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 FEZF1A0PJY2 475 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 LRRC14BA6NHZ5 514 aa5.56□□□□□ -1.52
SMARCC1-204ENST00000462198 E7EQ34 232 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms