RNA–Protein interactions for RNA: ENST00000461874.1

VARS-220, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-220ENST00000461874 CLCF1Q9UBD9 225 aa17.16■□□□□ 0.34
VARS-220ENST00000461874 DOCK7Q96N67 2140 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 GXYLT2A0PJZ3 443 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 FAM221AA4D161 298 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 EEF1E1-BLOC1S5C9J1V9 151 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 PIP5K1BO14986 540 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 EEF1E1O43324 174 aaKnown RBP17.15■□□□□ 0.34
VARS-220ENST00000461874 BCKDHAP12694 445 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 GPC1P35052 558 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 MAP3K8P41279 467 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 ASMTP46597 345 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 RFX3P48380 749 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 CLK3P49761 638 aaKnown RBP17.15■□□□□ 0.34
VARS-220ENST00000461874 MANFP55145 182 aaKnown RBP17.15■□□□□ 0.34
VARS-220ENST00000461874 STX5Q13190 355 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 GALNTL6Q49A17 601 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 FLYWCH1Q4VC44 716 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 EMBQ6PCB8 327 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 PLXDC2Q6UX71 529 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 MARCH3Q86UD3 253 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 KIF18BQ86Y91 864 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 CEP70Q8NHQ1 597 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 DUSP19Q8WTR2 217 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 NRGNQ92686 78 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 INTS12Q96CB8 462 aaKnown RBP17.15■□□□□ 0.34
VARS-220ENST00000461874 SFXN3Q9BWM7 321 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 EQTNQ9NQ60 294 aa17.15■□□□□ 0.34
VARS-220ENST00000461874 ACSS1Q9NUB1 689 aaPredicted RBP17.15■□□□□ 0.34
VARS-220ENST00000461874 NKX2-2O95096 273 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 KCNH1O95259 989 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 UTS2O95399 124 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 IGKV1D-16P01601 117 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 HK1P19367 917 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 ARRB2P32121 409 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 PRKAG1P54619 331 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 GANABQ14697 944 aaKnown RBP17.14■□□□□ 0.33
VARS-220ENST00000461874 VPS26BQ4G0F5 336 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 SPNS3Q6ZMD2 512 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 ZCCHC23Q6ZST2 131 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 CDRT4Q8N9R6 151 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 NUP43Q8NFH3 380 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 GPR151Q8TDV0 419 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 PIK3R3Q92569 461 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 CAVIN3Q969G5 261 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 MTERF3Q96E29 417 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 POLDIP3Q9BY77 421 aaKnown RBP17.14■□□□□ 0.33
VARS-220ENST00000461874 PTGES2Q9H7Z7 377 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 RASSF1Q9NS23 344 aa17.14■□□□□ 0.33
VARS-220ENST00000461874 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 TUBAL3A6NHL2 446 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 A6NNC1 897 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 HCRTR2O43614 444 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 PEPDP12955 493 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 CREB1P16220 341 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 DNAJA1P31689 397 aaKnown RBP17.13■□□□□ 0.33
VARS-220ENST00000461874 SERPINB5P36952 375 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 PRR5P85299 388 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 SORDQ00796 357 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 DAZAP2Q15038 168 aaPredicted RBP17.13■□□□□ 0.33
VARS-220ENST00000461874 XKR7Q5GH72 579 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 WDR93Q6P2C0 686 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 APOOLQ6UXV4 268 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 R3HCC1LQ7Z5L2 792 aaKnown RBP17.13■□□□□ 0.33
VARS-220ENST00000461874 EXOC3L1Q86VI1 746 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 GRAMD2AQ8IUY3 354 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 AGR3Q8TD06 166 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 GIMAP5Q96F15 307 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 RMND5BQ96G75 393 aaPredicted RBP17.13■□□□□ 0.33
VARS-220ENST00000461874 PPP3R2Q96LZ3 170 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 GPATCH1Q9BRR8 931 aaKnown RBP17.13■□□□□ 0.33
VARS-220ENST00000461874 TBL1XR1Q9BZK7 514 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 ACBD3Q9H3P7 528 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 GIMAP2Q9UG22 337 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 ATP6V1HQ9UI12 483 aa17.13■□□□□ 0.33
VARS-220ENST00000461874 MPDZO75970 2070 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 ABCA4P78363 2273 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 IGLV3-32A0A0A0MS00 114 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 TMEM114B3SHH9 223 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 LINC01387J3KSC0 135 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 EMC8O43402 210 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 TGM6O95932 706 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 CLDN15P56746 228 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 EEF1A1P68104 462 aaKnown RBP17.12■□□□□ 0.33
VARS-220ENST00000461874 C17orf67Q0P5P2 114 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 GRAMD1BQ3KR37 738 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 EEF1A1P5Q5VTE0 462 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 RAET1LQ5VY80 246 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 LRIG3Q6UXM1 1119 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 CHMP1BQ7LBR1 199 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 GCNT2Q8N0V5 402 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 GOT1L1Q8NHS2 421 aaPredicted RBP17.12■□□□□ 0.33
VARS-220ENST00000461874 SLC9A6Q92581 669 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 C1GALT1C1Q96EU7 318 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 MS4A4EQ96PG1 132 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 TMEM109Q9BVC6 243 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 CLEC4MQ9H2X3 399 aaPredicted RBP17.12■□□□□ 0.33
VARS-220ENST00000461874 ZNF337Q9Y3M9 751 aa17.12■□□□□ 0.33
VARS-220ENST00000461874 OR2M5A3KFT3 312 aa17.11■□□□□ 0.33
VARS-220ENST00000461874 SCAMP2O15127 329 aaKnown RBP17.11■□□□□ 0.33
VARS-220ENST00000461874 TYROBPO43914 113 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms