RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 ZNF33BQ06732 778 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 CD300CQ08708 224 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 TFDP1Q14186 410 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 HIGD2BQ4VC39 106 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 NHLRC3Q5JS37 347 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 SEL1L2Q5TEA6 688 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 FAM219BQ5XKK7 198 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 OLFML2AQ68BL7 652 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 SLC25A24Q6NUK1 477 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 ZNF343Q6P1L6 599 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 Q7L0L9 218 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 ANKRD37Q7Z713 158 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 LHFPL4Q7Z7J7 247 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 SLC25A42Q86VD7 318 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 POM121L12Q8N7R1 296 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 OR4Q3Q8NH05 313 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 TFB1MQ8WVM0 346 aaKnown RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 DTNBP1Q96EV8 351 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 C11orf24Q96F05 449 aaPredicted RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 VPS39Q96JC1 886 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 GSDMCQ9BYG8 508 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 UBXN6Q9BZV1 441 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 COMMD4Q9H0A8 199 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 GNB4Q9HAV0 340 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 ADGRL4Q9HBW9 690 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 EXOSC3Q9NQT5 275 aaKnown RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 TMOD2Q9NZR1 351 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 ZNF581Q9P0T4 197 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 CYTH4Q9UIA0 394 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 BARX2Q9UMQ3 279 aaPredicted RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 RNF115Q9Y4L5 304 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 KLF2Q9Y5W3 355 aaPredicted RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 SMAD5-AS1Q9Y6J3 95 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 SPACA6W5XKT8 324 aa3.01□□□□□ -1.93
CLK1-206ENST00000461326 PRG4Q92954 1404 aaPredicted RBP3.01□□□□□ -1.93
CLK1-206ENST00000461326 KIAA0586Q9BVV6 1533 aa3□□□□□ -1.93
CLK1-206ENST00000461326 A8MUI8 341 aa3□□□□□ -1.93
CLK1-206ENST00000461326 SHISA9B4DS77 424 aa3□□□□□ -1.93
CLK1-206ENST00000461326 PPIHO43447 177 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 PI15O43692 258 aa3□□□□□ -1.93
CLK1-206ENST00000461326 LCMT2O60294 686 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 GALR3O60755 368 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 TRIM3O75382 744 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 RHOBTB1O94844 696 aa3□□□□□ -1.93
CLK1-206ENST00000461326 HPP00738 406 aa3□□□□□ -1.93
CLK1-206ENST00000461326 IGFBP1P08833 259 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 WNT2P09544 360 aa3□□□□□ -1.93
CLK1-206ENST00000461326 ANXA3P12429 323 aa3□□□□□ -1.93
CLK1-206ENST00000461326 SDC1P18827 310 aa3□□□□□ -1.93
CLK1-206ENST00000461326 CYLC1P35663 651 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 HSD17B7P56937 341 aa3□□□□□ -1.93
CLK1-206ENST00000461326 RPS6P62753 249 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 RFTN1Q14699 578 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 UBE2V2Q15819 145 aa3□□□□□ -1.93
CLK1-206ENST00000461326 SNAI3Q3KNW1 292 aa3□□□□□ -1.93
CLK1-206ENST00000461326 LINC01620Q4KN68 170 aa3□□□□□ -1.93
CLK1-206ENST00000461326 LCE3AQ5TA76 89 aa3□□□□□ -1.93
CLK1-206ENST00000461326 MEDAGQ5VYS4 303 aa3□□□□□ -1.93
CLK1-206ENST00000461326 PNCKQ6P2M8 343 aa3□□□□□ -1.93
CLK1-206ENST00000461326 SCYL2Q6P3W7 929 aa3□□□□□ -1.93
CLK1-206ENST00000461326 BTNL3Q6UXE8 466 aa3□□□□□ -1.93
CLK1-206ENST00000461326 PPP1R42Q7Z4L9 355 aa3□□□□□ -1.93
CLK1-206ENST00000461326 IFNEQ86WN2 208 aa3□□□□□ -1.93
CLK1-206ENST00000461326 KRTAP7-1Q8IUC3 87 aa3□□□□□ -1.93
CLK1-206ENST00000461326 SLC22A18ASQ8N1D0 253 aa3□□□□□ -1.93
CLK1-206ENST00000461326 ZNF540Q8NDQ6 660 aa3□□□□□ -1.93
CLK1-206ENST00000461326 OR2L2Q8NH16 312 aa3□□□□□ -1.93
CLK1-206ENST00000461326 ART4Q93070 314 aa3□□□□□ -1.93
CLK1-206ENST00000461326 ZBED6CLQ96FA7 236 aaPredicted RBP3□□□□□ -1.93
CLK1-206ENST00000461326 SDSLQ96GA7 329 aa3□□□□□ -1.93
CLK1-206ENST00000461326 TXN2Q99757 166 aa3□□□□□ -1.93
CLK1-206ENST00000461326 POLR1EQ9GZS1 481 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 SLC25A51Q9H1U9 297 aa3□□□□□ -1.93
CLK1-206ENST00000461326 TIGARQ9NQ88 270 aa3□□□□□ -1.93
CLK1-206ENST00000461326 RBM28Q9NW13 759 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 ZNF446Q9NWS9 450 aa3□□□□□ -1.93
CLK1-206ENST00000461326 FAM120CQ9NX05 1096 aaKnown RBP3□□□□□ -1.93
CLK1-206ENST00000461326 AATFQ9NY61 560 aaKnown RBP eCLIP3□□□□□ -1.93
CLK1-206ENST00000461326 EHFQ9NZC4 300 aa3□□□□□ -1.93
CLK1-206ENST00000461326 EEA1Q15075 1411 aa3□□□□□ -1.93
CLK1-206ENST00000461326 PRXQ9BXM0 1461 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 A0A1B0GU03 582 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 A0A1W2PNV4 684 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 E9PAM4 449 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 PPIAL4DF5H284 164 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 CTAGE5O15320 804 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 LRRTM2O43300 516 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 STX11O75558 287 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 OPN1LWP04000 364 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 CT45A10P0DMU9 189 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 PDHBP11177 359 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 HNRNPA2B1P22626 353 aaKnown RBP2.99□□□□□ -1.93
CLK1-206ENST00000461326 BDH1Q02338 343 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 CYLC2Q14093 348 aaPredicted RBP2.99□□□□□ -1.93
CLK1-206ENST00000461326 CRMP1Q14194 572 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 ABRAXAS2Q15018 415 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 CAMK4Q16566 473 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 PPP1R3AQ16821 1122 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 CCDC57Q2TAC2 916 aa2.99□□□□□ -1.93
CLK1-206ENST00000461326 ATAD3BQ5T9A4 648 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms