RNA–Protein interactions for RNA: ENST00000461195.5

TRAF4-207, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 787 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-207ENST00000461195 ALOX5P09917 674 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 BMP7P18075 431 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 SRD5A2P31213 254 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 CCT3P49368 545 aaKnown RBP20.47■□□□□ 0.87
TRAF4-207ENST00000461195 OR5M10Q6IEU7 315 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 SLC16A11Q8NCK7 471 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 OR10Q1Q8NGQ4 319 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 FBXO30Q8TB52 745 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 ABTB1Q969K4 478 aaPredicted RBP20.47■□□□□ 0.87
TRAF4-207ENST00000461195 ARL8AQ96BM9 186 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 C16orf58Q96GQ5 468 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 UGT2B28Q9BY64 529 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 DPY30Q9C005 99 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 CXorf36Q9H7Y0 433 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 NEUROD4Q9HD90 331 aa20.47■□□□□ 0.87
TRAF4-207ENST00000461195 ABCA12Q86UK0 2595 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 TEP1Q99973 2627 aaKnown RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 NUP214P35658 2090 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 HDAC3O15379 428 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 CFLARO15519 480 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 HNRNPRO43390 633 aaKnown RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 UTS2O95399 124 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 ACTL6AO96019 429 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 IGKV1D-16P01601 117 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 HMGN2P05204 90 aaKnown RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 DUSP5Q16690 384 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 SPDYE7PQ495Y7 208 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 CCDC71Q8IV32 467 aaPredicted RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 OR4K17Q8NGC6 315 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 OR56A1Q8NGH5 318 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 JADE3Q92613 823 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 YIPF4Q9BSR8 244 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 PRDM14Q9GZV8 571 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 TAS2R10Q9NYW0 307 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 DKKL1Q9UK85 242 aa20.46■□□□□ 0.87
TRAF4-207ENST00000461195 MRPS18CQ9Y3D5 142 aaKnown RBP20.46■□□□□ 0.87
TRAF4-207ENST00000461195 TRPC5OSA6NMA1 111 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 FAM47E-STBD1D6RA91 191 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 SLCO1B7G3V0H7 640 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 SDHDO14521 159 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 LASP1Q14847 261 aaKnown RBP20.45■□□□□ 0.86
TRAF4-207ENST00000461195 SF3B4Q15427 424 aaKnown RBP eCLIP20.45■□□□□ 0.864e-8■■■■□ 19.3
TRAF4-207ENST00000461195 EXOSC6Q5RKV6 272 aaKnown RBP20.45■□□□□ 0.86
TRAF4-207ENST00000461195 OGFOD2Q6N063 350 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 IFNEQ86WN2 208 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 COX18Q8N8Q8 333 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 LILRB4Q8NHJ6 448 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 FAM110BQ8TC76 370 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 SFXN5Q8TD22 340 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 MOAP1Q96BY2 351 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 TBL1XR1Q9BZK7 514 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 ARGLU1Q9NWB6 273 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-207ENST00000461195 MARCOQ9UEW3 520 aaPredicted RBP20.45■□□□□ 0.86
TRAF4-207ENST00000461195 CAMK2AQ9UQM7 478 aa20.45■□□□□ 0.86
TRAF4-207ENST00000461195 KCNK2O95069 426 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 KITP10721 976 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 DPP4P27487 766 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 HBA1P69905 142 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 OCRLQ01968 901 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 STX5Q13190 355 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 TP53BP2Q13625 1128 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.44■□□□□ 0.86
TRAF4-207ENST00000461195 GRAMD1BQ3KR37 738 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 ACSF3Q4G176 576 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-207ENST00000461195 DCST1Q5T197 706 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 OR4F3Q6IEY1 312 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 CDC73Q6P1J9 531 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 FIGNL1Q6PIW4 674 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 MARCH3Q86UD3 253 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 WDR75Q8IWA0 830 aaKnown RBP20.44■□□□□ 0.86
TRAF4-207ENST00000461195 FADS6Q8N9I5 356 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 OR8J2Q8NGG1 315 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 MARVELD3Q96A59 401 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 OTUB1Q96FW1 271 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-207ENST00000461195 CHMP6Q96FZ7 201 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 WDYHV1Q96HA8 205 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 STACQ99469 402 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 BTBD2Q9BX70 525 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 ACTRT3Q9BYD9 372 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 RTN4RQ9BZR6 473 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 DSN1Q9H410 356 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 DUSP22Q9NRW4 184 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 GIN1Q9NXP7 522 aa20.44■□□□□ 0.86
TRAF4-207ENST00000461195 FAF1Q9UNN5 650 aaPredicted RBP20.44■□□□□ 0.86
TRAF4-207ENST00000461195 A0A0G2JNJ9 132 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 C17orf51A8MQB3 221 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 B4DXG7 233 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 RNASET2O00584 256 aaKnown RBP20.43■□□□□ 0.86
TRAF4-207ENST00000461195 KLF11O14901 512 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 SOX30O94993 753 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 KRT16P08779 473 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 LCN1P31025 176 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 KIR3DL1P43629 444 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 CLNS1AP54105 237 aaKnown RBP20.43■□□□□ 0.86
TRAF4-207ENST00000461195 DSCR4P56555 118 aaPredicted RBP20.43■□□□□ 0.86
TRAF4-207ENST00000461195 RIPPLY2Q5TAB7 128 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 AAGABQ6PD74 315 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 BHLHB9Q6PI77 547 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 ENPP6Q6UWR7 440 aa20.43■□□□□ 0.86
TRAF4-207ENST00000461195 HDXQ7Z353 690 aa20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms