RNA–Protein interactions for RNA: ENST00000460264.5

COL5A1-203, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 913 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-203ENST00000460264 OR2M3Q8NG83 312 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 CEP70Q8NHQ1 597 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 PIK3R3Q92569 461 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 GIMAP5Q96F15 307 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 RMND5BQ96G75 393 aaPredicted RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 SH3GL2Q99962 352 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 G6PC3Q9BUM1 346 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 C1orf50Q9BV19 199 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 C3orf14Q9HBI5 128 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 SLC24A3Q9HC58 644 aa17.16■□□□□ 0.34
COL5A1-203ENST00000460264 ZNF629Q9UEG4 869 aaPredicted RBP17.16■□□□□ 0.34
COL5A1-203ENST00000460264 CTIFO43310 598 aaKnown RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 NKX2-2O95096 273 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 KCNH1O95259 989 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 UTS2O95399 124 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 DDX5P17844 614 aaKnown RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 CHMP24386 653 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 RPL3P39023 403 aaKnown RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 STARP49675 285 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 PRKAG1P54619 331 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 DSCR4P56555 118 aaPredicted RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 CLDN18P56856 261 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 B3GALT5-AS1P59052 145 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 SRYQ05066 204 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 MYBPHQ13203 477 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 VPS26BQ4G0F5 336 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 MFSD12Q6NUT3 480 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 ADGRE4PQ86SQ3 457 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 NUDCD3Q8IVD9 361 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 C9orf106Q8NAJ2 232 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 OR7A2PQ8NGA2 310 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 GPR151Q8TDV0 419 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 ZNF559Q9BR84 538 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 DSN1Q9H410 356 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 SSU72Q9NP77 194 aaKnown RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 SDHAF3Q9NRP4 125 aa17.15■□□□□ 0.34
COL5A1-203ENST00000460264 SIRT3Q9NTG7 399 aaPredicted RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 RPH3AQ9Y2J0 694 aaPredicted RBP17.15■□□□□ 0.34
COL5A1-203ENST00000460264 ESPNB1AK53 854 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 SYT5O00445 386 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 EMC8O43402 210 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 LYPLA1O75608 230 aaPredicted RBP17.14■□□□□ 0.33
COL5A1-203ENST00000460264 HSPA4LO95757 839 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 ACP2P11117 423 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 ZNF708P17019 499 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 CAPN3P20807 821 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 MLC1Q15049 377 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 CHI3L2Q15782 390 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 GRAMD1BQ3KR37 738 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 FBXL19-AS1Q494R0 122 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 ARSKQ6UWY0 536 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 MARCH3Q86UD3 253 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 EXOC3L1Q86VI1 746 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 FNDC5Q8NAU1 212 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 SLC16A11Q8NCK7 471 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 PPP1R14CQ8TAE6 165 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 FBXO30Q8TB52 745 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 UCN2Q96RP3 112 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 MED11Q9P086 117 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 CLCF1Q9UBD9 225 aa17.14■□□□□ 0.33
COL5A1-203ENST00000460264 NUP214P35658 2090 aaPredicted RBP17.14■□□□□ 0.33
COL5A1-203ENST00000460264 WDR91A4D1P6 747 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 CLCA1A8K7I4 914 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 BIRC5O15392 142 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 ITM2AO43736 263 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 SERPINE1P05121 402 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 LAMP1P11279 417 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 CTSSP25774 331 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 UQCRC1P31930 480 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 CLK3P49761 638 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 DGKQP52824 942 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 PRR5P85299 388 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 GANABQ14697 944 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 DUSP5Q16690 384 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 EXOSC6Q5RKV6 272 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 CEP85LQ5SZL2 805 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 IL23RQ5VWK5 629 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 APOOLQ6UXV4 268 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 GALNT10Q86SR1 603 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 SLC9A6Q92581 669 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 RNASE6Q93091 150 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 TUBGCP3Q96CW5 907 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 FAM120BQ96EK7 910 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 TBL1XR1Q9BZK7 514 aa17.13■□□□□ 0.33
COL5A1-203ENST00000460264 ZCCHC3Q9NUD5 404 aaKnown RBP17.13■□□□□ 0.33
COL5A1-203ENST00000460264 SPG11Q96JI7 2443 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 HRNRQ86YZ3 2850 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-203ENST00000460264 CELSR1Q9NYQ6 3014 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 IGLV3-32A0A0A0MS00 114 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 TM9SF1O15321 606 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 IL18BPO95998 194 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 DHRS4L1P0CG22 281 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
COL5A1-203ENST00000460264 HK1P19367 917 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 OPRM1P35372 400 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 AGFG1P52594 562 aaKnown RBP17.12■□□□□ 0.33
COL5A1-203ENST00000460264 SNTB1Q13884 538 aaKnown RBP17.12■□□□□ 0.33
COL5A1-203ENST00000460264 BCL2A1Q16548 175 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 TNFAIP8L3Q5GJ75 292 aa17.12■□□□□ 0.33
COL5A1-203ENST00000460264 CPTPQ5TA50 214 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms