RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 CHMP1BQ7LBR1 199 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 C4orf33Q8N1A6 199 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 MEIOBQ8N635 442 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 ZFP28Q8NHY6 868 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 MBD6Q96DN6 1003 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 EGLN2Q96KS0 407 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 DACH2Q96NX9 599 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 YIPF4Q9BSR8 244 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 C12orf65Q9H3J6 166 aaKnown RBP20.59■□□□□ 0.89
PTPN4-207ENST00000460162 MKS1Q9NXB0 559 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 FLRT3Q9NZU0 649 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 PTGDR2Q9Y5Y4 395 aa20.59■□□□□ 0.89
PTPN4-207ENST00000460162 A0A1W2PNV4 684 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 SLC22A20A6NK97 555 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 TBX19O60806 448 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 KCNH1O95259 989 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 TGM6O95932 706 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 HK1P19367 917 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 EEFSECP57772 596 aaKnown RBP20.58■□□□□ 0.89
PTPN4-207ENST00000460162 STX5Q13190 355 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 P4HA3Q7Z4N8 544 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 CAMKMTQ7Z624 323 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 C10orf107Q8IVU9 208 aa20.58■□□□□ 0.89
PTPN4-207ENST00000460162 HOXB13Q92826 284 aaPredicted RBP20.58■□□□□ 0.89
PTPN4-207ENST00000460162 IQCGQ9H095 443 aaKnown RBP20.58■□□□□ 0.89
PTPN4-207ENST00000460162 MAP1AP78559 2803 aaPredicted RBP20.57■□□□□ 0.88
PTPN4-207ENST00000460162 CHEK2O96017 543 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 RAF1P04049 648 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 SDC1P18827 310 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 RFX3P48380 749 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 VPS26BQ4G0F5 336 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 KANK2Q63ZY3 851 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF551Q7Z340 670 aaPredicted RBP20.57■□□□□ 0.88
PTPN4-207ENST00000460162 TGIF2LYQ8IUE0 185 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 UBQLNLQ8IYU4 475 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 OR2T11Q8NH01 316 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 GFM2Q969S9 779 aaKnown RBP20.57■□□□□ 0.88
PTPN4-207ENST00000460162 PPCDCQ96CD2 204 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 C1GALT1C1Q96EU7 318 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 ZBED6CLQ96FA7 236 aaPredicted RBP20.57■□□□□ 0.88
PTPN4-207ENST00000460162 TMUB1Q9BVT8 246 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 TBL1XR1Q9BZK7 514 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 RTN4RQ9BZR6 473 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 REEP4Q9H6H4 257 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 MED11Q9P086 117 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 TMED5Q9Y3A6 229 aa20.57■□□□□ 0.88
PTPN4-207ENST00000460162 ZFHX3Q15911 3703 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 IGLV3-32A0A0A0MS00 114 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 SH3D21A4FU49 640 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 A8MXE2 369 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 MSTNO14793 375 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 TRIM13O60858 407 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 PRPS2P11908 318 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 GPC1P35052 558 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 CPOXP36551 454 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 PCYT1AP49585 367 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 RPL38P63173 70 aaKnown RBP20.56■□□□□ 0.88
PTPN4-207ENST00000460162 PRR5P85299 388 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 PDE7AQ13946 482 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 GLYR1Q49A26 553 aaPredicted RBP20.56■□□□□ 0.88
PTPN4-207ENST00000460162 Q6ZSR9 355 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 SMPDL3BQ92485 455 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 TRIM44Q96DX7 344 aaPredicted RBP20.56■□□□□ 0.88
PTPN4-207ENST00000460162 APOPT1Q96IL0 206 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 PIGQQ9BRB3 760 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 GATA5Q9BWX5 397 aaPredicted RBP20.56■□□□□ 0.88
PTPN4-207ENST00000460162 HHATLQ9HCP6 504 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 EQTNQ9NQ60 294 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 FIS1Q9Y3D6 152 aa20.56■□□□□ 0.88
PTPN4-207ENST00000460162 OR2M5A3KFT3 312 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 NKX2-2O95096 273 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 UTS2O95399 124 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 CD99P14209 185 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 GABRA3P34903 492 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 MAP3K8P41279 467 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 FRKP42685 505 aaPredicted RBP20.55■□□□□ 0.88
PTPN4-207ENST00000460162 PPP2R2AP63151 447 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 C17orf67Q0P5P2 114 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF385BQ569K4 471 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 ANKRD26P1Q6NSI1 321 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 MARCH3Q86UD3 253 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 RIBC1Q8N443 379 aaPredicted RBP20.55■□□□□ 0.88
PTPN4-207ENST00000460162 CDRT4Q8N9R6 151 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 CEP70Q8NHQ1 597 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 DUSP19Q8WTR2 217 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 CIDECQ96AQ7 238 aaPredicted RBP20.55■□□□□ 0.88
PTPN4-207ENST00000460162 MS4A4EQ96PG1 132 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 TSSK3Q96PN8 268 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 TUBB1Q9H4B7 451 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 ACSS1Q9NUB1 689 aaPredicted RBP20.55■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF175Q9Y473 711 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 DNAJC15Q9Y5T4 150 aa20.55■□□□□ 0.88
PTPN4-207ENST00000460162 ZNF469Q96JG9 3925 aaPredicted RBP20.55■□□□□ 0.88
PTPN4-207ENST00000460162 GXYLT2A0PJZ3 443 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 H3BML4 177 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 LSM1O15116 133 aaKnown RBP20.54■□□□□ 0.88
PTPN4-207ENST00000460162 SEC14L5O43304 696 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 TNFRSF21O75509 655 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 ATE1O95260 518 aa20.54■□□□□ 0.88
PTPN4-207ENST00000460162 ANGPTL1O95841 491 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms