RNA–Protein interactions for RNA: ENST00000460035.1

CCDC12-204, Transcript of coiled-coil domain containing 12, humanhuman

TSL 2

Gene CCDC12, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-204ENST00000460035 NFYCQ13952 458 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 MAPRE2Q15555 327 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 IGFBP7Q16270 282 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 MMEL1Q495T6 779 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 COX20Q5RI15 118 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 DCST2Q5T1A1 773 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 LRIF1Q5T3J3 769 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 SLC30A6Q6NXT4 461 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 C16orf62Q7Z3J2 963 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 PIGWQ7Z7B1 504 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 SNX32Q86XE0 403 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 FAM110BQ8TC76 370 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 RNF138Q8WVD3 245 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 NTNG2Q96CW9 530 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 AURKBQ96GD4 344 aaPredicted RBP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 BARD1Q99728 777 aaKnown RBP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 G6PC3Q9BUM1 346 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 OSBPL11Q9BXB4 747 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 ANGPTL4Q9BY76 406 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 TSPAN10Q9H1Z9 355 aaPredicted RBP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 SERHL2Q9H4I8 314 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 PROK2Q9HC23 129 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 FLRT3Q9NZU0 649 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 BOKQ9UMX3 212 aaPredicted RBP9.95□□□□□ -0.82
CCDC12-204ENST00000460035 NPIPA1Q9UND3 350 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 ARL2BPQ9Y2Y0 163 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 KIAA1549Q9HCM3 1950 aa9.95□□□□□ -0.82
CCDC12-204ENST00000460035 TFECO14948 347 aaPredicted RBP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 ASNA1O43681 348 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SCO2O43819 266 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 HPGDP15428 266 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 ZNF24P17028 368 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 MST1P26927 711 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 LCN1P31025 176 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SNTA1Q13424 505 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 CYLC2Q14093 348 aaPredicted RBP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 GRAMD1BQ3KR37 738 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 GPAT3Q53EU6 434 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 RNFT1Q5M7Z0 435 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 ZAR1Q86SH2 424 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 MARCH3Q86UD3 253 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 RETREG3Q86VR2 466 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SLC22A16Q86VW1 577 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 DPP10Q8N608 796 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 ZFP62Q8NB50 900 aaPredicted RBP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 FRMD6Q96NE9 622 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SDF2Q99470 211 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 TTTY12Q9BZ98 90 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 TBL1XR1Q9BZK7 514 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 DEFB127Q9H1M4 99 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 RAD21L1Q9H4I0 556 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 GALNT9Q9HCQ5 603 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 ZFP64Q9NPA5 681 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SDHAF3Q9NRP4 125 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SLC25A37Q9NYZ2 338 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 GMEB1Q9Y692 573 aa9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SMG1Q96Q15 3661 aaKnown RBP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 SPTBN1Q01082 2364 aaKnown RBP9.94□□□□□ -0.82
CCDC12-204ENST00000460035 HELZ2Q9BYK8 2649 aaKnown RBP9.93□□□□□ -0.82
CCDC12-204ENST00000460035 TRBV5-3A0A0A0MS03 114 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 NPIPA5A0A0B4J1W7 369 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 TMEM247A6NEH6 219 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 EVPLLA8MZ36 301 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 NPIPA7E9PJI5 369 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 ACOT7O00154 380 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 HMGN4O00479 90 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 FBP2O00757 339 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 SCDO00767 359 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 FADS1O60427 444 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 TRIM3O75382 744 aaPredicted RBP9.93□□□□□ -0.82
CCDC12-204ENST00000460035 STX11O75558 287 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 TRAPPC6AO75865 159 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 WISP2O76076 250 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 PDE9AO76083 593 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 UNC5CO95185 931 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 AK1P00568 194 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 NPIPA8P0DM63 369 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 NR2F1P10589 423 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 ETFAP13804 333 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 PPIBP23284 216 aaKnown RBP9.93□□□□□ -0.82
CCDC12-204ENST00000460035 EVI2BP34910 448 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 HPCAP84074 193 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 FOXO1Q12778 655 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 STX5Q13190 355 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 SLC10A1Q14973 349 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 TOMM20Q15388 145 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 RGNQ15493 299 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 GPR68Q15743 365 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 ARHGAP11BQ3KRB8 267 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 COQ5Q5HYK3 327 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 GKAP1Q5VSY0 366 aaPredicted RBP9.93□□□□□ -0.82
CCDC12-204ENST00000460035 ZNF324BQ6AW86 544 aaPredicted RBP9.93□□□□□ -0.82
CCDC12-204ENST00000460035 OR5M10Q6IEU7 315 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 DLEU7Q6UYE1 221 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 OLIG3Q7RTU3 272 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 DHDDSQ86SQ9 333 aa9.93□□□□□ -0.82
CCDC12-204ENST00000460035 ATCAYQ86WG3 371 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms