RNA–Protein interactions for RNA: ENST00000458564.5

HDLBP-227, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-227ENST00000458564 PTGES2Q9H7Z7 377 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 SDHAF3Q9NRP4 125 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 PLSCR4Q9NRQ2 329 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 NFU1Q9UMS0 254 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 OR10H1Q9Y4A9 318 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 AP4B1Q9Y6B7 739 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 CUBNO60494 3623 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 RTTNQ86VV8 2226 aa9.37□□□□□ -0.91
HDLBP-227ENST00000458564 H3BML4 177 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 SEC14L5O43304 696 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 SS18L1O75177 396 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 CRLF1O75462 422 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 AQP8O94778 261 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 OR4F21O95013 312 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 INHBAP08476 426 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 TSPAN8P19075 237 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 IL11P20809 199 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 TIA1P31483 386 aaKnown RBP eCLIP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 HSD17B3P37058 310 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 SERPINB9P50453 376 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 CLCQ05315 142 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 ACSM2AQ08AH3 577 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF155Q12901 538 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 TCHHL1Q5QJ38 904 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 ACSM2BQ68CK6 577 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 STAC2Q6ZMT1 411 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 GGNQ86UU5 652 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF611Q8N823 705 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 CDYL2Q8N8U2 506 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 LRRN4CLQ8ND94 238 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 UHMK1Q8TAS1 419 aaKnown RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 GMPPAQ96IJ6 420 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 ACPTQ9BZG2 426 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 RTN4RQ9BZR6 473 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 KLHL4Q9C0H6 718 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 SIRT5Q9NXA8 310 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 NINJ2Q9NZG7 142 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 MED11Q9P086 117 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 SENP1Q9P0U3 644 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 C19orf53Q9UNZ5 99 aaPredicted RBP9.36□□□□□ -0.91
HDLBP-227ENST00000458564 EMC9Q9Y3B6 208 aa9.36□□□□□ -0.91
HDLBP-227ENST00000458564 GNG14A0A1W2PPG7 69 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ESYT3A0FGR9 886 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 MYO1GB0I1T2 1018 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 HS3ST1O14792 307 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ULK1O75385 1050 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 IL33O95760 270 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 IFI6P09912 130 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 CHN1P15882 459 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF17P17021 662 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 PSMB1P20618 241 aaKnown RBP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 DDCP20711 480 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 STX5Q13190 355 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ETFDHQ16134 617 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 DECR1Q16698 335 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 UBAP2Q5T6F2 1119 aaKnown RBP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 FAM219BQ5XKK7 198 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ANKRD34AQ69YU3 496 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 OR2L13Q8N349 312 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 C16orf78Q8WTQ4 265 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 APIPQ96GX9 242 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ADGRG7Q96K78 797 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 PAFAH2Q99487 392 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 REPIN1Q9BWE0 567 aaKnown RBP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 Q9N2J8 555 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 FANCFQ9NPI8 374 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 PAQR5Q9NXK6 330 aaPredicted RBP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 TAS2R7Q9NYW3 318 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 FLRT3Q9NZU0 649 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 STOML1Q9UBI4 398 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF180Q9UJW8 692 aa9.35□□□□□ -0.91
HDLBP-227ENST00000458564 MRTO4Q9UKD2 239 aaKnown RBP9.35□□□□□ -0.91
HDLBP-227ENST00000458564 SERTM1A2A2V5 107 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 C7orf72A4D263 438 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 TTC36A6NLP5 189 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 UPK1AO00322 258 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 SLC6A8P48029 635 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 CLK3P49761 638 aaKnown RBP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 PSMD4P55036 377 aaKnown RBP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 ATP5J2P56134 94 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 PRR5P85299 388 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF763Q0D2J5 394 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 C17orf67Q0P5P2 114 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 TNK1Q13470 666 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 SGCBQ16585 318 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 EXOC3L2Q2M3D2 409 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 CTU2Q2VPK5 515 aaKnown RBP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 UNC50Q53HI1 259 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 ZNF678Q5SXM1 525 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 HEPHL1Q6MZM0 1159 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 ADAM5Q6NVV9 412 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 GPRIN3Q6ZVF9 776 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 GTPBP8Q8N3Z3 284 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 OR5M1Q8NGP8 315 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 DUSP19Q8WTR2 217 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 HOXB13Q92826 284 aaPredicted RBP9.34□□□□□ -0.91
HDLBP-227ENST00000458564 TMEM237Q96Q45 408 aa9.34□□□□□ -0.91
HDLBP-227ENST00000458564 BBS4Q96RK4 519 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms