RNA–Protein interactions for RNA: ENST00000458085.6

CAPN13-203, Transcript of calpain 13, humanhuman

TSL 5

Gene CAPN13, Length 2,269 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-203ENST00000458085 KCNK2O95069 426 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 IGKV1D-16P01601 117 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 IFI6P09912 130 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 GKN3PP0CG01 181 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 TNNI3P19429 210 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 ALAS2P22557 587 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 C21orf33P30042 268 aaPredicted RBP15.19■□□□□ 0.02
CAPN13-203ENST00000458085 HOXA6P31267 233 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 LARS2Q15031 903 aaKnown RBP15.19■□□□□ 0.02
CAPN13-203ENST00000458085 CCDC81Q6ZN84 652 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PRICKLE2Q7Z3G6 844 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 TMPRSS9Q7Z410 1059 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PLXDC1Q8IUK5 500 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 DEPDC4Q8N2C3 294 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 IQCF1Q8N6M8 205 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 CCDC74AQ96AQ1 378 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 DGAT2Q96PD7 388 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PSORS1C1Q9UIG5 152 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 ZNF232Q9UNY5 417 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PCDHGB1Q9Y5G3 927 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 FER1L5A0AVI2 2057 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 CCDC163A0A0D9SF12 145 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 H0YIG0 161 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 CLDN4O14493 209 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 BRINP1O60477 761 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 ARRB1P49407 418 aaPredicted RBP15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PGDP52209 483 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 MRPL2Q5T653 305 aaKnown RBP15.19■□□□□ 0.02
CAPN13-203ENST00000458085 C1orf94Q6P1W5 598 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 NPSR1Q6W5P4 371 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 PLEKHM3Q6ZWE6 761 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 KANSL1Q7Z3B3 1105 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 GGHQ92820 318 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 VSTM2LQ96N03 204 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 IER2Q9BTL4 223 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 CNPPD1Q9BV87 410 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 NDOR1Q9UHB4 597 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 ENOPH1Q9UHY7 261 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 ERVK-19Q9WJR5 959 aa15.19■□□□□ 0.02
CAPN13-203ENST00000458085 MN1Q10571 1320 aaPredicted RBP15.19■□□□□ 0.02
CAPN13-203ENST00000458085 AGRPO00253 132 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 COQ9O75208 318 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 THBS1P07996 1170 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 EPHA8P29322 1005 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 GPR3P46089 330 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 STT3AP46977 705 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ARL4DP49703 201 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 CDC42P60953 191 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 NR1D2Q14995 579 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 NNATQ16517 81 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 GDF7Q7Z4P5 450 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 KIF18BQ86Y91 864 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 MAML2Q8IZL2 1156 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 D2HGDHQ8N465 521 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ZNF420Q8TAQ5 688 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 IL4I1Q96RQ9 567 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 COPS4Q9BT78 406 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 DCUN1D5Q9BTE7 237 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 LMF2Q9BU23 707 aaKnown RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 TRIM45Q9H8W5 580 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PRMT8Q9NR22 394 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 LANCL2Q9NS86 450 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PLCXD1Q9NUJ7 323 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 GPR83Q9NYM4 423 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PILRBQ9UKJ0 227 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ADAMTS9Q9P2N4 1935 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ZNF99A8MXY4 864 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ZNF701M0R085 212 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 AP3D1O14617 1153 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ZNF749O43361 778 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PRKNO60260 465 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ADRA2AP08913 450 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 NID1P14543 1247 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 NR4A1P22736 598 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 HTR2AP28223 471 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 EFNA3P52797 238 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 TRAM2Q15035 370 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 SLX4IPQ5VYV7 408 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 NIPAL1Q6NVV3 410 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PTCHD4Q6ZW05 846 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PRSS48Q7RTY5 328 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 WDR5BQ86VZ2 330 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ERI1Q8IV48 349 aaKnown RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 SLC38A4Q969I6 547 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 FKBP10Q96AY3 582 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 SLC41A3Q96GZ6 507 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 SLC41A2Q96JW4 573 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 CNDP2Q96KP4 475 aaKnown RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PHOX2BQ99453 314 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 YIPF2Q9BWQ6 316 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 PLA2G12AQ9BZM1 189 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ACOT13Q9NPJ3 140 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 FKBP14Q9NWM8 211 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 CNIH4Q9P003 139 aa15.18■□□□□ 0.02
CAPN13-203ENST00000458085 ATXN7L1Q9ULK2 861 aaPredicted RBP15.18■□□□□ 0.02
CAPN13-203ENST00000458085 LY6G6EA0A0G2JKS1 128 aa15.17■□□□□ 0.02
CAPN13-203ENST00000458085 DBIP07108 87 aaKnown RBP15.17■□□□□ 0.02
CAPN13-203ENST00000458085 GNSP15586 552 aa15.17■□□□□ 0.02
CAPN13-203ENST00000458085 ACVR2AP27037 513 aa15.17■□□□□ 0.02
CAPN13-203ENST00000458085 HSD17B7P56937 341 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms