RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 FIGNL2A6NMB9 653 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 E9PBE3 544 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 SCN2BO60939 215 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 CBR3O75828 277 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 SOX30O94993 753 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 HMGN2P05204 90 aaKnown RBP15.8■□□□□ 0.12
USP39-208ENST00000455732 KRT16P08779 473 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 ALOX5P09917 674 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 LCN1P31025 176 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 CCT3P49368 545 aaKnown RBP15.8■□□□□ 0.12
USP39-208ENST00000455732 DUSP5Q16690 384 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.8■□□□□ 0.12
USP39-208ENST00000455732 NHSL2Q5HYW2 709 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 ANXA8L1Q5VT79 327 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 OR4F3Q6IEY1 312 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 BHLHB9Q6PI77 547 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 RPRMLQ8N4K4 120 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 RMND5BQ96G75 393 aaPredicted RBP15.8■□□□□ 0.12
USP39-208ENST00000455732 C16orf58Q96GQ5 468 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 OR2B2Q9GZK3 357 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 EXO5Q9H790 373 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 PNPLA3Q9NST1 481 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 GPATCH2Q9NW75 528 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 GPR45Q9Y5Y3 372 aa15.8■□□□□ 0.12
USP39-208ENST00000455732 GOLGA8QA0A0J9YX86 632 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 PRSS51A0A1B0GVH4 220 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 GOLGA8OA6NCC3 632 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 GOLGA8NF8WBI6 632 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 HNRNPRO43390 633 aaKnown RBP15.79■□□□□ 0.12
USP39-208ENST00000455732 WDR1O75083 606 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 TRAPPC6AO75865 159 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 KCNK2O95069 426 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 CLDN14O95500 239 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 IGKV1D-16P01601 117 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 NGFRP08138 427 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 TP53BP2Q13625 1128 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 LASP1Q14847 261 aaKnown RBP15.79■□□□□ 0.12
USP39-208ENST00000455732 SPDYE7PQ495Y7 208 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 SLC9B1Q4ZJI4 515 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 WLSQ5T9L3 541 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 CDC73Q6P1J9 531 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 CLECL1Q8IZS7 167 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 FAM83FQ8NEG4 500 aaPredicted RBP15.79■□□□□ 0.12
USP39-208ENST00000455732 FBXO30Q8TB52 745 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 ACTRT3Q9BYD9 372 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 PIGUQ9H490 435 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 CHST11Q9NPF2 352 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 SERHLQ9NQF3 203 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 INTS9Q9NV88 658 aaKnown RBP15.79■□□□□ 0.12
USP39-208ENST00000455732 FLRT3Q9NZU0 649 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 TNFRSF10DQ9UBN6 386 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 ACAD8Q9UKU7 415 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 USH1CQ9Y6N9 552 aa15.79■□□□□ 0.12
USP39-208ENST00000455732 NUP214P35658 2090 aaPredicted RBP15.79■□□□□ 0.12
USP39-208ENST00000455732 PCNX3Q9H6A9 2034 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 C2orf72A6NCS6 295 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 CFLARO15519 480 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 UTS2O95399 124 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 HOXD4P09016 255 aaPredicted RBP15.78■□□□□ 0.12
USP39-208ENST00000455732 IDO1P14902 403 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 ACVR2AP27037 513 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 SRD5A2P31213 254 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 TRPC1P48995 793 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 PHC1P78364 1004 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 CRYZQ08257 329 aaKnown RBP15.78■□□□□ 0.12
USP39-208ENST00000455732 SPANXN4Q5MJ08 99 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 TMEM211Q6ICI0 200 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 COX18Q8N8Q8 333 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 FADS6Q8N9I5 356 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 VPS37AQ8NEZ2 397 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 OR5M9Q8NGP3 310 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 DYDC1Q8WWB3 177 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 JADE3Q92613 823 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 MARVELD3Q96A59 401 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 SDCCAG3Q96C92 435 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 TEX37Q96LM6 180 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 BTBD2Q9BX70 525 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 ACBD3Q9H3P7 528 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 SDHAF3Q9NRP4 125 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 FAF1Q9UNN5 650 aaPredicted RBP15.78■□□□□ 0.12
USP39-208ENST00000455732 MRPS18CQ9Y3D5 142 aaKnown RBP15.78■□□□□ 0.12
USP39-208ENST00000455732 FBN2P35556 2912 aa15.78■□□□□ 0.12
USP39-208ENST00000455732 IGLV3-32A0A0A0MS00 114 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 C15orf38-AP3S2A0A0A6YYH1 394 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 B4DXG7 233 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 TGDSO95455 350 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 GABRA1P14867 456 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 PTGER4P35408 488 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 SOAT1P35610 550 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 RFX3P48380 749 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 CLK3P49761 638 aaKnown RBP15.77■□□□□ 0.12
USP39-208ENST00000455732 UFM1P61960 85 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 POU6F2P78424 691 aaPredicted RBP15.77■□□□□ 0.12
USP39-208ENST00000455732 GSTA3Q16772 222 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 GRAMD1BQ3KR37 738 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 FAM174BQ3ZCQ3 159 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 PDCD4Q53EL6 469 aaKnown RBP15.77■□□□□ 0.12
USP39-208ENST00000455732 EIPR1Q53HC9 387 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 VASNQ6EMK4 673 aa15.77■□□□□ 0.12
USP39-208ENST00000455732 RTL6Q6ICC9 239 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms