RNA–Protein interactions for RNA: ENST00000453689.5

VPS16-205, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS16, Length 966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-205ENST00000453689 PDE9AO76083 593 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 KRT75O95678 551 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 LDLRP01130 860 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 HMGN2P05204 90 aaKnown RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 CASP3P42574 277 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 CA7P43166 264 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 MAGEA5P43359 124 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 RPP38P78345 283 aaKnown RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 PSG6Q00889 435 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 ZNHIT3Q15649 155 aaPredicted RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.42□□□□□ -0.26
VPS16-205ENST00000453689 TRMT5Q32P41 509 aaKnown RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 TBCELQ5QJ74 424 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 Q6ZPB1 254 aaPredicted RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 NUP54Q7Z3B4 507 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 C6orf120Q7Z4R8 191 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 FGD2Q7Z6J4 655 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 FJX1Q86VR8 437 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 SPPL2CQ8IUH8 684 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 SLC44A2Q8IWA5 706 aaPredicted RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 CLEC4FQ8N1N0 589 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 FAM109AQ8N4B1 249 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 PCYOX1LQ8NBM8 494 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 OR4N2Q8NGD1 307 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 ZFP90Q8TF47 636 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 HOXB13Q92826 284 aaPredicted RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 HGDQ93099 445 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 RCN3Q96D15 328 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 NODALQ96S42 347 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 DOHHQ9BU89 302 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 ANGPTL4Q9BY76 406 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 ZFP64Q9NPA5 681 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 SLC6A13Q9NSD5 602 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 GPATCH2Q9NW75 528 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 FAF1Q9UNN5 650 aaPredicted RBP13.42□□□□□ -0.26
VPS16-205ENST00000453689 PCDHB14Q9Y5E9 798 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 ICE1Q9Y2F5 2266 aa13.42□□□□□ -0.26
VPS16-205ENST00000453689 TRGV8A0A0C4DH27 118 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 A0A1B0GTH9 108 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 A0A1B0GUH1 482 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 OR6C70A6NIJ9 312 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 TRIM3O75382 744 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 REM1O75628 298 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 RFPL3SP0C7P2 107 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 MAP3K8P41279 467 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 PSPHP78330 225 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 C3AR1Q16581 482 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 EXOSC6Q5RKV6 272 aaKnown RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 CDC73Q6P1J9 531 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 TMEM81Q6P7N7 255 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 ANGPTL8Q6UXH0 198 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 DLEU7Q6UYE1 221 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 TRPM8Q7Z2W7 1104 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 WDR53Q7Z5U6 358 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 MSRB3Q8IXL7 192 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 FBXO30Q8TB52 745 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 MIPOL1Q8TD10 442 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 SLC9A6Q92581 669 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 JADE3Q92613 823 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 RELTQ969Z4 430 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 NTNG2Q96CW9 530 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 SLC35A4Q96G79 324 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 AURKBQ96GD4 344 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 C16orf58Q96GQ5 468 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 ZNF597Q96LX8 424 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 JSRP1Q96MG2 331 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 ACTRT3Q9BYD9 372 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 ZNF703Q9H7S9 590 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 METTL7AQ9H8H3 244 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 TPT1P8Q9HAU6 139 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 GID8Q9NWU2 228 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 SLC25A37Q9NYZ2 338 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 VAPAQ9P0L0 249 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 SLAMF8Q9P0V8 285 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 TAGLN3Q9UI15 199 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 SH3BGRL2Q9UJC5 107 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 TINAGQ9UJW2 476 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 OR10H1Q9Y4A9 318 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 LIPGQ9Y5X9 500 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 USP9XQ93008 2570 aaPredicted RBP13.41□□□□□ -0.26
VPS16-205ENST00000453689 COL12A1Q99715 3063 aa13.41□□□□□ -0.26
VPS16-205ENST00000453689 PCNX1Q96RV3 2341 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 WIPF3A6NGB9 483 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 ABCB7O75027 752 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 SOX30O94993 753 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 NKX2-2O95096 273 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 SNX4O95219 450 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 NPPAP01160 153 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 CELA3AP09093 270 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 ALOX5P09917 674 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 ACP2P11117 423 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 ABOP16442 354 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 MATN1P21941 496 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 PPIBP23284 216 aaKnown RBP13.4□□□□□ -0.26
VPS16-205ENST00000453689 IL12BP29460 328 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 PTGDSP41222 190 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 MAGEA8P43361 318 aa13.4□□□□□ -0.26
VPS16-205ENST00000453689 KHKP50053 298 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 197.9 ms