RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 PRAMEF7Q5VXH5 474 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 SLC30A6Q6NXT4 461 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 PAQR6Q6TCH4 344 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 GDF7Q7Z4P5 450 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 ARHGAP22Q7Z5H3 698 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 VWA5B2Q8N398 1253 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 OR4N2Q8NGD1 307 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 CLIP3Q96DZ5 547 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 Q96MT0 163 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 MGLLQ99685 303 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 DCSTAMPQ9H295 470 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 GPR27Q9NS67 375 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 TBC1D23Q9NUY8 699 aa10.97□□□□□ -0.65
VTA1-203ENST00000452973 SH3D21A4FU49 640 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 AGR2O95994 175 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 NME1P15531 152 aaKnown RBP10.96□□□□□ -0.65
VTA1-203ENST00000452973 GNSP15586 552 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 FUT1P19526 365 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 MAOAP21397 527 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 PCYT1AP49585 367 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 ZNF91Q05481 1191 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 COX10Q12887 443 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 ITGADQ13349 1161 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 FZD5Q13467 585 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 DOC2BQ14184 412 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 NR1D2Q14995 579 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 DGUOKQ16854 277 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 AMZ1Q400G9 498 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 FHL5Q5TD97 284 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 C12orf73Q69YU5 71 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 SHFQ7M4L6 423 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 GKN2Q86XP6 184 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 CDRT4Q8N9R6 151 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 PIGXQ8TBF5 258 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 DTNBP1Q96EV8 351 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 PLEKHA8Q96JA3 519 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 CNPPD1Q9BV87 410 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 TWSG1Q9GZX9 223 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 SAP130Q9H0E3 1048 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 KCNE5Q9UJ90 142 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 IFT52Q9Y366 437 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 PCDH15Q96QU1 1955 aa10.96□□□□□ -0.65
VTA1-203ENST00000452973 IGHV5-51A0A0C4DH38 117 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 AGAP5A6NIR3 686 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 C10orf142B7Z368 130 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 SOX3P41225 446 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 MLLT3P42568 568 aaPredicted RBP10.96□□□□□ -0.66
VTA1-203ENST00000452973 RGS6P49758 472 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 RAB38P57729 211 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 SMAD2Q15796 467 aaKnown RBP10.96□□□□□ -0.66
VTA1-203ENST00000452973 OR8D4Q8NGM9 314 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 BORCS5Q969J3 196 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 EXOSC4Q9NPD3 245 aaKnown RBP10.96□□□□□ -0.66
VTA1-203ENST00000452973 NTMQ9P121 344 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 PLOD3O60568 738 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 IFNA16P05015 189 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 INHBBP09529 407 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 ALAS2P22557 587 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CALRP27797 417 aaKnown RBP10.96□□□□□ -0.66
VTA1-203ENST00000452973 IFNGR2P38484 337 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CAPZBP47756 277 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 SMSP52788 366 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 ZNF267Q14586 743 aaPredicted RBP10.96□□□□□ -0.66
VTA1-203ENST00000452973 MANEAQ5SRI9 462 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 ZNF619Q8N2I2 560 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 GRHL3Q8TE85 626 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 RIT1Q92963 219 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 HLA-CQ95604 372 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CENPOQ9BU64 300 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 ERGIC3Q9Y282 383 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CARD8Q9Y2G2 431 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 KLK4Q9Y5K2 254 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 PMF1-BGLAPU3KQ54 211 aa10.96□□□□□ -0.66
VTA1-203ENST00000452973 CACNA1IQ9P0X4 2223 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 AQP9O43315 295 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SLITRK5O94991 958 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 IDUAP35475 653 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SNRPGP62308 76 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 POU6F2P78424 691 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 ATP1A4Q13733 1029 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 MFSD4BQ5TF39 518 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SLC27A4Q6P1M0 643 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 ZNF687Q8N1G0 1237 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 DYNC2LI1Q8TCX1 351 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 GNPDA2Q8TDQ7 276 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 SH3YL1Q96HL8 342 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 NDOR1Q9UHB4 597 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 MRPS17Q9Y2R5 130 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 A0A1W2PR77 199 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 TGFBR3LH3BV60 316 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 FOXS1O43638 330 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 CBX7O95931 251 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 RPLP0P05388 317 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 DCNP07585 359 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 POU3F3P20264 500 aaPredicted RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 RACK1P63244 317 aaKnown RBP10.95□□□□□ -0.66
VTA1-203ENST00000452973 RELAQ04206 551 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 MGAT2Q10469 447 aa10.95□□□□□ -0.66
VTA1-203ENST00000452973 NDUFA9Q16795 377 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms