RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 D6RAR5 112 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 SYT5O00445 386 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 OR10H3O60404 316 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 ZIC2O95409 532 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 ALOX12P18054 663 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 CSF2RBP32927 897 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 SOX18P35713 384 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 TGFBR2P37173 567 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 ST13P50502 369 aaKnown RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 CHRNEQ04844 493 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 TARDBPQ13148 414 aaKnown RBP eCLIP9.99□□□□□ -0.815e-8■■■■■ 32.9
PKP4-206ENST00000452162 SLX4IPQ5VYV7 408 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 HEPHL1Q6MZM0 1159 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 MFSD12Q6NUT3 480 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 PODNL1Q6PEZ8 512 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 AVL9Q8NBF6 648 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 RERGQ96A58 199 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 ARHGDIGQ99819 225 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 QRSL1Q9H0R6 528 aaKnown RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 PLGRKTQ9HBL7 147 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 AMBNQ9NP70 447 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 HRASLS2Q9NWW9 162 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 MS4A12Q9NXJ0 267 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 CALML5Q9NZT1 146 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 SELENONQ9NZV5 590 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 LILRA5A6NI73 299 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 MPZL2O60487 215 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 NME6O75414 186 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 TP53P04637 393 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 TYRP1P17643 537 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 ZNF10P21506 573 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 C21orf33P30042 268 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 PPM1FP49593 454 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 MLLT10P55197 1068 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 PPP1CAP62136 330 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 OLR1P78380 273 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 C12orf73Q69YU5 71 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 CDC73Q6P1J9 531 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 ZNF574Q6ZN55 896 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 PRSS41Q7RTY9 318 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 P2RY8Q86VZ1 359 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 OR2L13Q8N349 312 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 MORN4Q8NDC4 146 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 SLC35A4Q96G79 324 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 LDHAL6BQ9BYZ2 381 aaPredicted RBP9.99□□□□□ -0.81
PKP4-206ENST00000452162 UCK1Q9HA47 277 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 NECTIN3Q9NQS3 549 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 GPR83Q9NYM4 423 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 CHST2Q9Y4C5 530 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 NINQ8N4C6 2090 aa9.99□□□□□ -0.81
PKP4-206ENST00000452162 SH3D21A4FU49 640 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 OR5K3A6NET4 321 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 ZNF860A6NHJ4 632 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 AGRPO00253 132 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 SLC22A1O15245 554 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 ZSCAN9O15535 394 aaPredicted RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 CSO75390 466 aaKnown RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 CLPXO76031 633 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 UBXN7O94888 489 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 ALPPP05187 535 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 IGFBP1P08833 259 aaPredicted RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 POU1F1P28069 291 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 TLX1P31314 330 aaPredicted RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 EPHA4P54764 986 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 GPLD1P80108 840 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 IRF3Q14653 427 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 ISXQ2M1V0 245 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 FAM214AQ32MH5 1076 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 MANEAQ5SRI9 462 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 ATAD3BQ5T9A4 648 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 FHL5Q5TD97 284 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 CD300LDQ6UXZ3 194 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 WDR53Q7Z5U6 358 aaPredicted RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 OR4N5Q8IXE1 308 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 RBM12BQ8IXT5 1001 aaKnown RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 ZG16BQ96DA0 208 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 AHCYL2Q96HN2 611 aaKnown RBP9.98□□□□□ -0.81
PKP4-206ENST00000452162 FNDC11Q9BVV2 318 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 IGF2RP11717 2491 aa9.98□□□□□ -0.81
PKP4-206ENST00000452162 SOX14O95416 240 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 STSP08842 583 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 CPMP14384 443 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SNRPGP62308 76 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 ALDH6A1Q02252 535 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 MOGQ16653 247 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ZNF628Q5EBL2 1059 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ZNF311Q5JNZ3 666 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 FRRS1Q6ZNA5 592 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 PTCHD4Q6ZW05 846 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 C16orf62Q7Z3J2 963 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 VRK2Q86Y07 508 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SHISA5Q8N114 240 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 LINC00471Q8N535 108 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SLC16A11Q8NCK7 471 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 SIMC1Q8NDZ2 872 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 B3GNT7Q8NFL0 401 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 DEPDC7Q96QD5 511 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 ITPAQ9BY32 194 aa9.97□□□□□ -0.81
PKP4-206ENST00000452162 POLR2J3Q9H1A7 115 aaKnown RBP9.97□□□□□ -0.81
PKP4-206ENST00000452162 SEMA6CQ9H3T2 930 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms