RNA–Protein interactions for RNA: ENST00000449476.6

CTC1-202, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 4,797 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-202ENST00000449476 DEFA5Q01523 94 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 NSDHLQ15738 373 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 FCRLBQ6BAA4 426 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 HMBOX1Q6NT76 420 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 ZC3H14Q6PJT7 736 aaKnown RBP9.82□□□□□ -0.84
CTC1-202ENST00000449476 LRRN1Q6UXK5 716 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 KCTD9Q7L273 389 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 SYNPOQ8N3V7 929 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 NAXEQ8NCW5 288 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 ADAMTS16Q8TE57 1224 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 PNPLA2Q96AD5 504 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 ALOXE3Q9BYJ1 711 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 THSD1Q9NS62 852 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 ACSS1Q9NUB1 689 aaPredicted RBP9.82□□□□□ -0.84
CTC1-202ENST00000449476 USP36Q9P275 1121 aaKnown RBP9.82□□□□□ -0.84
CTC1-202ENST00000449476 EPHA6Q9UF33 1036 aa9.82□□□□□ -0.84
CTC1-202ENST00000449476 HTR3EA5X5Y0 456 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 CDC40O60508 579 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTC1-202ENST00000449476 FMO6PO60774 539 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 PRAMEF2O60811 474 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 CFL1P23528 166 aaKnown RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 EIF5AL1Q6IS14 154 aaKnown RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 C1orf94Q6P1W5 598 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 RSPO2Q6UXX9 243 aaPredicted RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 SPNS2Q8IVW8 549 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ADAMTS18Q8TE60 1221 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ZMYND19Q96E35 227 aaPredicted RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 ACTR6Q9GZN1 396 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 FOLH1BQ9HBA9 442 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 NOTOA8MTQ0 251 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 LDB3O75112 727 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 RDH16O75452 317 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 PROS1P07225 676 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 RAB40BQ12829 278 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 XKR7Q5GH72 579 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 TCTE1Q5JU00 501 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 BAIAP2L2Q6UXY1 529 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 TOR1AIP2Q8NFQ8 470 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ZDHHC1Q8WTX9 485 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 CDS1Q92903 461 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 POTEKPQ9BYX7 375 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 C8orf33Q9H7E9 229 aaPredicted RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 ASB6Q9NWX5 421 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 MRPL15Q9P015 296 aaKnown RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 MAB21L2Q9Y586 359 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 TEX13DA0A0J9YY54 714 aaPredicted RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 MTRF1O75570 445 aaKnown RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 MAS1P04201 325 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 CHMP24386 653 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ARRB2P32121 409 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 CLRN1P58418 232 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ERVFC1P60507 584 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 HNRNPKP61978 463 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTC1-202ENST00000449476 ZNF91Q05481 1191 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 GBX1Q14549 363 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 RTL10Q7L3V2 364 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 STX12Q86Y82 276 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 ZNF619Q8N2I2 560 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 LILRA3Q8N6C8 439 aaPredicted RBP9.81□□□□□ -0.84
CTC1-202ENST00000449476 OR6Q1Q8NGQ2 317 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 OLIG1Q8TAK6 271 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 NECTIN4Q96NY8 510 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 P2RY12Q9H244 342 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 NKX2-4Q9H2Z4 354 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 KLHL21Q9UJP4 597 aa9.81□□□□□ -0.84
CTC1-202ENST00000449476 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 TP53I11O14683 189 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 MAN2A2P49641 1150 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 DESI1Q6ICB0 168 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 CNIH2Q6PI25 160 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 Q6ZSR6 202 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 ZNF765Q7L2R6 523 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 VNN3Q9NY84 501 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 ARAP2Q8WZ64 1704 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 A0A0A6YYC8 382 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 I3L1I5 382 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 LYRM1O43325 122 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 RIDAP52758 137 aaKnown RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 CTBSQ01459 385 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 CCNJQ5T5M9 372 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 PIP5KL1Q5T9C9 394 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 C1orf189Q5VU69 101 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 SFRP4Q6FHJ7 346 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 ZNF584Q8IVC4 421 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 OR13F1Q8NGS4 319 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 OR2L8Q8NGY9 312 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 OR5K2Q8NHB8 316 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 NUDT8Q8WV74 236 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 MUL1Q969V5 352 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 CCDC120Q96HB5 630 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 OR7D2Q96RA2 312 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 INSM2Q96T92 566 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 TIMM29Q9BSF4 260 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 RANBP3Q9H6Z4 567 aaPredicted RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 DDX31Q9H8H2 851 aaKnown RBP9.8□□□□□ -0.84
CTC1-202ENST00000449476 SACM1LQ9NTJ5 587 aa9.8□□□□□ -0.84
CTC1-202ENST00000449476 KCMF1Q9P0J7 381 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms