RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 UBE2E3Q969T4 207 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NT5C3BQ969T7 300 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HMCESQ96FZ2 354 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 P2RX7Q99572 595 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 OMDQ99983 421 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 MRTO4Q9UKD2 239 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 GBF1Q92538 1859 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SHANK1Q9Y566 2161 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 A0A096LPI6 279 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ANXA2P2A6NMY6 339 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 MKRN2OSH3BPM6 223 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 M0QYT0 321 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NPM3O75607 178 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 RECQL4O94761 1208 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HKR1P10072 659 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 BMP5P22003 454 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 CCR1P32246 355 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 RAD52P43351 418 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HYAL2Q12891 473 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ECH1Q13011 328 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 PLA2G7Q13093 441 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 SRSF5Q13243 272 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 NPY5RQ15761 445 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TMEM183BQ1AE95 376 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 GLYR1Q49A26 553 aaPredicted RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 TSTD2Q5T7W7 516 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 HEPHL1Q6MZM0 1159 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TRMT10BQ6PF06 316 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 TSSK4Q6SA08 328 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 MOB3CQ70IA8 216 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 NLRC3Q7RTR2 1065 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 LDHDQ86WU2 507 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 C2orf69Q8N8R5 385 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF738Q8NE65 137 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 OR52H1Q8NGJ2 320 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 OR9I1Q8NGQ6 314 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 OR2A12Q8NGT7 310 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 TWIST2Q8WVJ9 160 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 C14orf79Q96F83 325 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF558Q96NG5 402 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 LRRC3BQ96PB8 259 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 ZNF607Q96SK3 696 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 BANF2Q9H503 90 aa2.77□□□□□ -1.97
CHD9-203ENST00000447540 STRAPQ9Y3F4 350 aaKnown RBP2.77□□□□□ -1.97
CHD9-203ENST00000447540 TCRBV7S2A1N4TA0A589 114 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 A8MXE2 369 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 ATP5J2-PTCD1G3V325 749 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TBX18O95935 607 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CSH1P0DML2 217 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CSH2P0DML3 217 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SCGB1A1P11684 91 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TBPP20226 339 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CMPK1P30085 196 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GJA5P36382 358 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 NNMTP40261 264 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 MDH2P40926 338 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 CEBPDP49716 269 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 SNRPEP62304 92 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 SPTBN1Q01082 2364 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 CD300CQ08708 224 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 LIPIQ6XZB0 460 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SPNS3Q6ZMD2 512 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GTF2H5Q6ZYL4 71 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 RTL10Q7L3V2 364 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TRMT11Q7Z4G4 463 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 PROSER2Q86WR7 435 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 VRK2Q86Y07 508 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 METTL21AQ8WXB1 218 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TMEM19Q96HH6 336 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TEPSINQ96N21 525 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 MRPL37Q9BZE1 423 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 EGLN1Q9GZT9 426 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GHRLQ9UBU3 117 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 KCNMB2Q9Y691 235 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 TCRBV21S2A2A0A5A6 115 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 OR6C75A6NL08 312 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 A6NL46 340 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SIGLEC5O15389 551 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 FLRT2O43155 660 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 LPOP22079 712 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 THBS4P35443 961 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CDH12P55289 794 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CACNB2Q08289 660 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 SV2CQ496J9 727 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CELF3Q5SZQ8 465 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 TMEM244Q5VVB8 128 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 GPAT2Q6NUI2 795 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 RNF165Q6ZSG1 346 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 C1orf87Q8N0U7 546 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 COLGALT1Q8NBJ5 622 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 OR10H5Q8NGA6 315 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 OR4K2Q8NGD2 314 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 SLC2A12Q8TD20 617 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 PHF21BQ96EK2 531 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 MYOCQ99972 504 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 CPPED1Q9BRF8 314 aaPredicted RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 AHSPQ9NZD4 102 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 DNMT3BQ9UBC3 853 aaKnown RBP2.76□□□□□ -1.97
CHD9-203ENST00000447540 PCOLCE2Q9UKZ9 415 aa2.76□□□□□ -1.97
CHD9-203ENST00000447540 RNF150Q9ULK6 438 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms