RNA–Protein interactions for RNA: ENST00000447360.6

LRRC28-203, Transcript of leucine rich repeat containing 28, humanhuman

TSL 1 (best) BASIC

Gene LRRC28, Length 1,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-203ENST00000447360 NINJ2Q9NZG7 142 aa6.33□□□□□ -1.4
LRRC28-203ENST00000447360 TXNDC16Q9P2K2 825 aa6.33□□□□□ -1.4
LRRC28-203ENST00000447360 B3GALT5Q9Y2C3 310 aa6.33□□□□□ -1.4
LRRC28-203ENST00000447360 ALPK2Q86TB3 2170 aa6.33□□□□□ -1.4
LRRC28-203ENST00000447360 A0A0A6YYD5 115 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PGRMC2O15173 223 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 TMPRSS11DO60235 418 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 AQP8O94778 261 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PLGP00747 810 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 C2P06681 752 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PCNAP12004 261 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 MTHFD2P13995 350 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PORP16435 677 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 DRD5P21918 477 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 USF1P22415 310 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 GRK2P25098 689 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PTX3P26022 381 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CRABP2P29373 138 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 STX2P32856 288 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PPICP45877 212 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 HSPA7P48741 367 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 COMPP49747 757 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 XKP51811 444 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CTBP2P56545 445 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CLDN20P56880 219 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PSPHP78330 225 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 IRF9Q00978 393 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ZNF844Q08AG5 666 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 MAP4K2Q12851 820 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 NAB1Q13506 487 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 GANABQ14697 944 aaKnown RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 RAB35Q15286 201 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 NNATQ16517 81 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 SGCBQ16585 318 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CTU2Q2VPK5 515 aaKnown RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 FAM174BQ3ZCQ3 159 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PDLIM3Q53GG5 364 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 GLE1Q53GS7 698 aaKnown RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 AGAP6Q5VW22 663 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 RAET1LQ5VY80 246 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 OR5M10Q6IEU7 315 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CYP20A1Q6UW02 462 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 IL17RELQ6ZVW7 336 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CENPLQ8N0S6 344 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PDPRQ8NCN5 879 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 KBTBD8Q8NFY9 601 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 OR4K17Q8NGC6 315 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 OR4K14Q8NGD5 310 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 HUS1BQ8NHY5 278 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 STAG3L4Q8TBR4 150 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ZFAND2BQ8WV99 257 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 RNF138Q8WVD3 245 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 IFT81Q8WYA0 676 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 FAM168AQ92567 244 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 NEUROG1Q92886 237 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 S100PBPQ96BU1 408 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 SLC35A4Q96G79 324 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ZNF717Q9BY31 904 aaPredicted RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ITPAQ9BY32 194 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 PRRG4Q9BZD6 226 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CD244Q9BZW8 370 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 CDC42EP4Q9H3Q1 356 aaKnown RBP6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ACSS3Q9H6R3 686 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ALG9Q9H6U8 611 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 NMRAL1Q9HBL8 299 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 EHD3Q9NZN3 535 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 STOML1Q9UBI4 398 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ZNF639Q9UID6 485 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ACOT9Q9Y305 439 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 ZNF337Q9Y3M9 751 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 TSC22D4Q9Y3Q8 395 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 AP4B1Q9Y6B7 739 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 NOTCH1P46531 2555 aa6.32□□□□□ -1.4
LRRC28-203ENST00000447360 A0A096LPK6 155 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 LOC100289279A0A1B0GTE1 492 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 A0A1W2PS29 197 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 OR2M5A3KFT3 312 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 SLC35F4A4IF30 521 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 B4DXG7 233 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 UBXN8O00124 270 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 SEC14L5O43304 696 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 KERAO60938 352 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 EEDO75530 441 aaKnown RBP6.31□□□□□ -1.4
LRRC28-203ENST00000447360 CSF3P09919 207 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 LTA4HP09960 611 aaKnown RBP6.31□□□□□ -1.4
LRRC28-203ENST00000447360 CTAGE8P0CG41 777 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 CPMP14384 443 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 NT5EP21589 574 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 TCEA1P23193 301 aaKnown RBP6.31□□□□□ -1.4
LRRC28-203ENST00000447360 BSGP35613 385 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 GAS1P54826 345 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 IRX1P78414 480 aaPredicted RBP6.31□□□□□ -1.4
LRRC28-203ENST00000447360 BSPH1Q075Z2 132 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 MGAT2Q10469 447 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 CUL3Q13618 768 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 EFR3AQ14156 821 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 SLMAPQ14BN4 828 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 TAB1Q15750 504 aa6.31□□□□□ -1.4
LRRC28-203ENST00000447360 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.31□□□□□ -1.4
LRRC28-203ENST00000447360 PRICKLE4Q2TBC4 344 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms