RNA–Protein interactions for RNA: ENST00000447199.1

SPTLC1P1-201, Transcript of serine palmitoyltransferase long chain base subunit 1 pseudogene 1, humanhuman

BASIC

Gene SPTLC1P1, Length 261 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1P1-201ENST00000447199 ALDH3A1P30838 453 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ART1P52961 327 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 HSPB3Q12988 150 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GANABQ14697 944 aaKnown RBP14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ZNHIT3Q15649 155 aaPredicted RBP14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 APOOLQ6UXV4 268 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CDC20BQ86Y33 519 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RIBC1Q8N443 379 aaPredicted RBP14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 INTS12Q96CB8 462 aaKnown RBP14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GIMAP5Q96F15 307 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 MED11Q9P086 117 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 LGALS13Q9UHV8 139 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TMED5Q9Y3A6 229 aa14.33□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TUBAL3A6NHL2 446 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 NPHS1O60500 1241 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 NKX2-2O95096 273 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 LINC00032P0C843 101 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PRPS2P11908 318 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TCEA1P23193 301 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ARRB2P32121 409 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GABRA3P34903 492 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 VSNL1P62760 191 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RPL38P63173 70 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 EXOSC6Q5RKV6 272 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 MARCH3Q86UD3 253 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GCNT2Q8N0V5 402 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 LINC01560Q8TB33 94 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 DUSP19Q8WTR2 217 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PIK3R3Q92569 461 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 C1GALT1C1Q96EU7 318 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TSSK3Q96PN8 268 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 FAM111AQ96PZ2 611 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 FOXC2Q99958 501 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 MECRQ9BV79 373 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RBM24Q9BX46 236 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 SDHAF3Q9NRP4 125 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ACSS1Q9NUB1 689 aaPredicted RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GALNT8Q9NY28 637 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 SLC17A7Q9P2U7 560 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 BAIAP2L1Q9UHR4 511 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ST6GALNAC2Q9UJ37 374 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 MRTO4Q9UKD2 239 aaKnown RBP14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 FIS1Q9Y3D6 152 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ZNF337Q9Y3M9 751 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ABCA4P78363 2273 aa14.32□□□□□ -0.12
SPTLC1P1-201ENST00000447199 MED13LQ71F56 2210 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 A0A1W2PNV4 684 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TLDC2A0PJX2 215 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 OR2M5A3KFT3 312 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 A8MXE2 369 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 H0YC42 278 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 AKAP10O43572 662 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 UTS2O95399 124 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 BCKDHAP12694 445 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PEPDP12955 493 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 HK1P19367 917 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 SUCLG1P53597 346 aaKnown RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PSMD4P55036 377 aaKnown RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TPD52P55327 224 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PRR5P85299 388 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 STX5Q13190 355 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TMEM44Q2T9K0 475 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GRAMD1BQ3KR37 738 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 XKR7Q5GH72 579 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ARL13AQ5H913 290 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 EXOC3L1Q86VI1 746 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GRAMD2AQ8IUY3 354 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CLHC1Q8NHS4 586 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 FAM110BQ8TC76 370 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TWIST2Q8WVJ9 160 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PPCDCQ96CD2 204 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ZBED6CLQ96FA7 236 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RMND5BQ96G75 393 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ACBD3Q9H3P7 528 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PIGMQ9H3S5 423 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 C3orf14Q9HBI5 128 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 EQTNQ9NQ60 294 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CCM2LQ9NUG4 571 aaPredicted RBP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 TRAF6Q9Y4K3 522 aa14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 NIPBLQ6KC79 2804 aaeCLIP14.31□□□□□ -0.12
SPTLC1P1-201ENST00000447199 LINC01387J3KSC0 135 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 PIP5K1BO14986 540 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GOSR1O95249 250 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 KCNH1O95259 989 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ANGPTL1O95841 491 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CHEK2O96017 543 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CRHP06850 196 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 NGFRP08138 427 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 ACP2P11117 423 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RIPPLY3P57055 190 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 EEF1A1P68104 462 aaKnown RBP14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 GLYR1Q49A26 553 aaPredicted RBP14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 VPS26BQ4G0F5 336 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 EEF1A1P5Q5VTE0 462 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 RAET1LQ5VY80 246 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 LUZP2Q86TE4 346 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 HOMEZQ8IX15 550 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 CDRT4Q8N9R6 151 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 NUP43Q8NFH3 380 aa14.3□□□□□ -0.12
SPTLC1P1-201ENST00000447199 OR6Y1Q8NGX8 325 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms