RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 PRDM7Q9NQW5 492 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 CYSLTR2Q9NS75 346 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 KLHL28Q9NXS3 571 aa17.85■□□□□ 0.45
SDCBP-204ENST00000447182 C4orf51C9J302 202 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 RNF13O43567 381 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 HK1P19367 917 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 CSNK2A2P19784 350 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 CEBPEQ15744 281 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 BTBD16Q32M84 506 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF750Q32MQ0 723 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ZNF57Q68EA5 555 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 BICRALQ6AI39 1079 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 RTL10Q7L3V2 364 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 LRRC28Q86X40 367 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ACOT4Q8N9L9 421 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 OR2T33Q8NG76 320 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 OR5M3Q8NGP4 307 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 DEFB118Q96PH6 123 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 H2AFY2Q9P0M6 372 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 EXTL2Q9UBQ6 330 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 MUC22E2RYF6 1773 aaPredicted RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 A0A0X1KG70 313 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 OR5F1O95221 314 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 NFATC1O95644 943 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 AIFM1O95831 613 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 BCL6P41182 706 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 CLCNKAP51800 687 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 AGFG1P52594 562 aaKnown RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ATP12AP54707 1039 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 P2RX3P56373 397 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 NUMA1Q14980 2115 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 C6orf132Q5T0Z8 1188 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 HBMQ6B0K9 141 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 SLC48A1Q6P1K1 146 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ABHD17CQ6PCB6 329 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 NRMQ8IXM6 262 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ETFBKMTQ8IXQ9 262 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 NUP43Q8NFH3 380 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 OR8K5Q8NH50 307 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 KCTD12Q96CX2 325 aaKnown RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 HYLS1Q96M11 299 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 LRRC3BQ96PB8 259 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 WACQ9BTA9 647 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 LGR4Q9BXB1 951 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 FOLH1BQ9HBA9 442 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 HINT3Q9NQE9 182 aaKnown RBP17.84■□□□□ 0.45
SDCBP-204ENST00000447182 NLGN3Q9NZ94 848 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 ACSL5Q9ULC5 683 aa17.84■□□□□ 0.45
SDCBP-204ENST00000447182 HIDE1A8MVS5 230 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 ERI3O43414 337 aaKnown RBP17.83■□□□□ 0.45
SDCBP-204ENST00000447182 PLOD3O60568 738 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 ADH1CP00326 375 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 THY1P04216 161 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 F3P13726 295 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 NDUFV2P19404 249 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 ATP5A1P25705 553 aaKnown RBP17.83■□□□□ 0.45
SDCBP-204ENST00000447182 ATP6V1E1P36543 226 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 GPR4P46093 362 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 NTHL1P78549 312 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 CSTF1Q05048 431 aaKnown RBP17.83■□□□□ 0.45
SDCBP-204ENST00000447182 SMARCD3Q6STE5 483 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 LYPD8Q6UX82 237 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 PLEKHM3Q6ZWE6 761 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 GDF7Q7Z4P5 450 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 NR2C2APQ86WQ0 139 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 GID4Q8IVV7 300 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 SIRT6Q8N6T7 355 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 ELP4Q96EB1 424 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 SLC28A3Q9HAS3 691 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 GALNT9Q9HCQ5 603 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 CSNK1G3Q9Y6M4 447 aa17.83■□□□□ 0.45
SDCBP-204ENST00000447182 GSAPA4D1B5 854 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 SOCS6O14544 535 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 AKR7A2O43488 359 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 EVI2BP34910 448 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 MPIP34949 423 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 RFX3P48380 749 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 RGS8P57771 180 aaPredicted RBP17.83■□□□□ 0.44
SDCBP-204ENST00000447182 MRPL28Q13084 256 aaKnown RBP17.83■□□□□ 0.44
SDCBP-204ENST00000447182 GPR176Q14439 515 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 PLA1AQ53H76 456 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 SLC37A3Q8NCC5 494 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 OR4M2Q8NGB6 313 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 OR4M1Q8NGD0 313 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 SLC41A3Q96GZ6 507 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 GFM1Q96RP9 751 aaKnown RBP17.83■□□□□ 0.44
SDCBP-204ENST00000447182 DIABLOQ9NR28 239 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 BABAM2Q9NXR7 383 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 PTGFRNQ9P2B2 879 aa17.83■□□□□ 0.44
SDCBP-204ENST00000447182 SLC2A10O95528 541 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 C8orf89P0DMQ9 161 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 P2RY2P41231 377 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 MC3RP41968 323 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 RAB28P51157 221 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 ERVFC1P60507 584 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 MLF2Q15773 248 aaPredicted RBP17.82■□□□□ 0.44
SDCBP-204ENST00000447182 CXXC5Q7LFL8 322 aaKnown RBP17.82■□□□□ 0.44
SDCBP-204ENST00000447182 CPOQ8IVL8 374 aa17.82■□□□□ 0.44
SDCBP-204ENST00000447182 ACBD7Q8N6N7 88 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms