RNA–Protein interactions for RNA: ENST00000444896.1

HMGB3P6-201, Transcript of high mobility group box 3 pseudogene 6, humanhuman

BASIC

Gene HMGB3P6, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P6-201ENST00000444896 STX17P56962 302 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 RPS4XP62701 263 aaKnown RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 AP1B1Q10567 949 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 CBX3Q13185 183 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 EMC2Q15006 297 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 EXOSC7Q15024 291 aaKnown RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRADDQ15628 312 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 UNC50Q53HI1 259 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF658Q5TYW1 1059 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 RTL6Q6ICC9 239 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 SYT10Q6XYQ8 523 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 TMUB2Q71RG4 321 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 LRRC49Q8IUZ0 686 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 SPEM1Q8N4L4 309 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 SAMD12Q8N8I0 201 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 FLVCR1-AS1Q8TAF5 88 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 NELFBQ8WX92 580 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 DYNLL2Q96FJ2 89 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 RPGRIP1Q96KN7 1286 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 PANX2Q96RD6 677 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 COA1Q9GZY4 146 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 GLT8D2Q9H1C3 349 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 AKAP7Q9P0M2 348 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRMT6Q9UJA5 497 aaKnown RBP3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 MGAT4AQ9UM21 535 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 KLHDC2Q9Y2U9 406 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 HCFC1P51610 2035 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 GON4LQ3T8J9 2241 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 QSER1Q2KHR3 1735 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 MYH1P12882 1939 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 CDK5RAP2Q96SN8 1893 aa3.52□□□□□ -1.85
HMGB3P6-201ENST00000444896 FOCADQ5VW36 1801 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 BAZ2BQ9UIF8 2168 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 A0A1B0GTH9 108 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 MACROD2A1Z1Q3 448 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF840PA6NDX5 716 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SMCO2A6NFE2 343 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM64A6NGJ6 449 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 TRIM64BA6NI03 449 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 PES1O00541 588 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 E2F3O00716 465 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 BCL2L11O43521 198 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 FGFR1OPO95684 399 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SERPINF2P08697 491 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 HLA-DPA1P20036 260 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 MAT2AP31153 395 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 CCT6AP40227 531 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 TNFRSF4P43489 277 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 NOVP48745 357 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SLC12A3P55017 1021 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 GNG11P61952 73 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 GALK2Q01415 458 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 UBXN1Q04323 297 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 GFPT1Q06210 699 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 TSTA3Q13630 321 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 KLF5Q13887 457 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 KARSQ15046 597 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 C17orf58Q2M2W7 97 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 GPAT3Q53EU6 434 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 EIPR1Q53HC9 387 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 HSP90AA4PQ58FG1 418 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 NHLRC3Q5JS37 347 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 NKAIN2Q5VXU1 208 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SPINK14Q6IE38 97 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 STEAP1BQ6NZ63 245 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 CDC42EP5Q6NZY7 148 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 DLEU7Q6UYE1 221 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SMIM5Q71RC9 77 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 GPR142Q7Z601 462 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 CEACAM19Q7Z692 300 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 PEX5LQ8IYB4 626 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 LINC00518Q8N0U6 118 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 ATP6V0A1Q93050 837 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 EEF2KMTQ96G04 330 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 DHTKD1Q96HY7 919 aaPredicted RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 TSG101Q99816 390 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 RPP25Q9BUL9 199 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 CCSER1Q9C0I3 900 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 BLZF1Q9H2G9 400 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 THAP9Q9H5L6 903 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SP140LQ9H930 580 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 Q9HAA7 133 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 IL1RL2Q9HB29 575 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 SAMSN1Q9NSI8 373 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNHIT6Q9NWK9 470 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 ZNF581Q9P0T4 197 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 MRPL11Q9Y3B7 192 aaKnown RBP3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 RALGAPA1Q6GYQ0 2036 aa3.51□□□□□ -1.85
HMGB3P6-201ENST00000444896 LTBP1Q14766 1721 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 FOXI3A8MTJ6 420 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 EEF2KO00418 725 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 MPHOSPH10O00566 681 aaKnown RBP3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 CHEK1O14757 476 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 SH2D1BO14796 132 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 CYTH3O43739 400 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 LRP3O75074 770 aa3.5□□□□□ -1.85
HMGB3P6-201ENST00000444896 ATP6V1G1O75348 118 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms