RNA–Protein interactions for RNA: ENST00000444814.2

LTBR-204, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 1,553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-204ENST00000444814 NGFRP08138 427 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 HOXD4P09016 255 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 CCDC159P0C7I6 412 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 EFNA1P20827 205 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 MATN1P21941 496 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 EVI2BP34910 448 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 SOX18P35713 384 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 RFC3P40938 356 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 UQCRFS1P47985 274 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TMED1Q13445 227 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 UBAP2LQ14157 1087 aaKnown RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 WLSQ5T9L3 541 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TIGD3Q6B0B8 471 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TMEM211Q6ICI0 200 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 C16orf62Q7Z3J2 963 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 C6orf120Q7Z4R8 191 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 SIMC1Q8NDZ2 872 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 OR4K17Q8NGC6 315 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 HOXB13Q92826 284 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 OR52B2Q96RD2 323 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 DEFB127Q9H1M4 99 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 TSPAN10Q9H1Z9 355 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 ZNF703Q9H7S9 590 aaPredicted RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 CXorf36Q9H7Y0 433 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 UBQLN4Q9NRR5 601 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 THUMPD1Q9NXG2 353 aaKnown RBP11.22□□□□□ -0.61
LTBR-204ENST00000444814 STOML1Q9UBI4 398 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 C15orf41Q9Y2V0 281 aa11.22□□□□□ -0.61
LTBR-204ENST00000444814 CNTRLQ7Z7A1 2325 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 AQP7O14520 342 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 ZNF195O14628 629 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 IGHG3P01860 377 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 CYP4B1P13584 511 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 MAGEA5P43359 124 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 SMSP52788 366 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 C17orf67Q0P5P2 114 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 FOXO1Q12778 655 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 GNA13Q14344 377 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 GANABQ14697 944 aaKnown RBP11.21□□□□□ -0.61
LTBR-204ENST00000444814 CMPK2Q5EBM0 449 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 ZNF621Q6ZSS3 439 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 PLCZ1Q86YW0 608 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 GOT1L1Q8NHS2 421 aaPredicted RBP11.21□□□□□ -0.61
LTBR-204ENST00000444814 GIMAP5Q96F15 307 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 NODALQ96S42 347 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 SLC35A5Q9BS91 424 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 TP63Q9H3D4 680 aaPredicted RBP11.21□□□□□ -0.61
LTBR-204ENST00000444814 CCDC134Q9H6E4 229 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 NPHS2Q9NP85 383 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 POLE3Q9NRF9 147 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 CHCHD3Q9NX63 227 aaKnown RBP11.21□□□□□ -0.61
LTBR-204ENST00000444814 DKKL1Q9UK85 242 aa11.21□□□□□ -0.61
LTBR-204ENST00000444814 ATMQ13315 3056 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 A0A0G2JND7 137 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 A0A1B0GVC2 190 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 CCDC154A6NI56 674 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 PYCARD-AS1I3L0S3 204 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 GNB5O14775 395 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 KCNK2O95069 426 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 UTS2O95399 124 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 TPOP07202 933 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 ACP2P11117 423 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 GABRA1P14867 456 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 NCF2P19878 526 aaPredicted RBP11.2□□□□□ -0.62
LTBR-204ENST00000444814 PPIBP23284 216 aaKnown RBP11.2□□□□□ -0.62
LTBR-204ENST00000444814 MSX1P28360 303 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 PTGER4P35408 488 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 MAP3K8P41279 467 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 CA7P43166 264 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 WNT3P56703 355 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 DUSP5Q16690 384 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 C6orf10Q5SRN2 563 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 AAGABQ6PD74 315 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 RPTNQ6XPR3 784 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 Q6ZPB1 254 aaPredicted RBP11.2□□□□□ -0.62
LTBR-204ENST00000444814 TRILQ7L0X0 811 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 MAVSQ7Z434 540 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 MTERF4Q7Z6M4 381 aaKnown RBP11.2□□□□□ -0.62
LTBR-204ENST00000444814 ANKRD46Q86W74 232 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 PM20D2Q8IYS1 436 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 CLECL1Q8IZS7 167 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 ARL6IP6Q8N6S5 226 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 SLC16A11Q8NCK7 471 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 OR4N2Q8NGD1 307 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 OR52N2Q8NGI0 321 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 OR5AK3PQ8NH89 298 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 FAM57AQ8TBR7 257 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 MIPOL1Q8TD10 442 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 SSC4DQ8WTU2 575 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 NEURL3Q96EH8 262 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 YIPF4Q9BSR8 244 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 NSRP1Q9H0G5 558 aaKnown RBP11.2□□□□□ -0.62
LTBR-204ENST00000444814 DCTN4Q9UJW0 460 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 ZNF835Q9Y2P0 537 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 CROCCQ5TZA2 2017 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 ZNF462Q96JM2 2506 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 A0A0G2JMM0 328 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 A0A1B0GTH9 108 aa11.2□□□□□ -0.62
LTBR-204ENST00000444814 A0A1W2PPB8 328 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms