RNA–Protein interactions for RNA: ENST00000439681.1

UBR3-205, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-205ENST00000439681 RAB3IPQ96QF0 476 aaPredicted RBP6.89□□□□□ -1.31
UBR3-205ENST00000439681 G6PC3Q9BUM1 346 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 QRSL1Q9H0R6 528 aaKnown RBP6.89□□□□□ -1.31
UBR3-205ENST00000439681 MUC13Q9H3R2 512 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 ZBTB20Q9HC78 741 aaPredicted RBP6.89□□□□□ -1.31
UBR3-205ENST00000439681 CPNE5Q9HCH3 593 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 CALML5Q9NZT1 146 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 MAGEL2Q9UJ55 1249 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 ANGPT4Q9Y264 503 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 WDR45Q9Y484 360 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 GPC6Q9Y625 555 aaPredicted RBP6.89□□□□□ -1.31
UBR3-205ENST00000439681 ZFHX4Q86UP3 3567 aa6.89□□□□□ -1.31
UBR3-205ENST00000439681 CROCCQ5TZA2 2017 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CCDC88CQ9P219 2028 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NUP214P35658 2090 aaPredicted RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 NPIPA5A0A0B4J1W7 369 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 TCRBV5S2A0A599 114 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 OR6C70A6NIJ9 312 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 AGAP5A6NIR3 686 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 A6NL46 340 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NPIPA7E9PJI5 369 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ADAM10O14672 748 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 PPM1BO75688 479 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 UGT2B17O75795 530 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CEACAM4O75871 244 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 UTS2O95399 124 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NPIPA8P0DM63 369 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CYP4B1P13584 511 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ETS2P15036 469 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 RPS4Y1P22090 263 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 LCN1P31025 176 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SOX3P41225 446 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 RFX3P48380 749 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CCL11P51671 97 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 PNLIPRP2P54317 469 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 POLE2P56282 527 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NRG3P56975 720 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 FBXW4P57775 412 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 DMTNQ08495 405 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CCNIQ14094 377 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 GPR68Q15743 365 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF141Q15928 474 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 MEP1AQ16819 746 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 FLYWCH1Q4VC44 716 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 INTS11Q5TA45 600 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 APOOLQ6UXV4 268 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 PATL1Q86TB9 770 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF619Q8N2I2 560 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SLC22A8Q8TCC7 542 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF354BQ96LW1 612 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 COL21A1Q96P44 957 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 DENND2DQ9H6A0 471 aaPredicted RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF552Q9H707 407 aaPredicted RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 DCAF13Q9NV06 445 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 STMN3Q9NZ72 180 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 MRTO4Q9UKD2 239 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 CHST2Q9Y4C5 530 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 FADS1O60427 444 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 TPST1O60507 370 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 EPPINO95925 133 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SERPINA1P01009 418 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 OPN1SWP03999 348 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CD247P20963 164 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ATP6V1C1P21283 382 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SSR4P51571 173 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ATP12AP54707 1039 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 RAPSNQ13702 412 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 KPNB1Q14974 876 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 NTRK2Q16620 822 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 DUSP7Q16829 419 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 GRAMD1BQ3KR37 738 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 KLHL26Q53HC5 615 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 CYBRD1Q53TN4 286 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 C1orf146Q5VVC0 180 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 BROXQ5VW32 411 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 LRRC69Q6ZNQ3 347 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NUP54Q7Z3B4 507 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 COMTD1Q86VU5 262 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF227Q86WZ6 799 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 VRK2Q86Y07 508 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 BEST3Q8N1M1 668 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 KDF1Q8NAX2 398 aaPredicted RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 GPR32P1Q8NGA4 272 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 OR10Q1Q8NGQ4 319 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 RNF138Q8WVD3 245 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZCCHC14Q8WYQ9 949 aaKnown RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 FAM162AQ96A26 154 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NTNG2Q96CW9 530 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SPACA9Q96E40 222 aaPredicted RBP6.88□□□□□ -1.31
UBR3-205ENST00000439681 NSMCE2Q96MF7 247 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 NODALQ96S42 347 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 ZNF607Q96SK3 696 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 RTN4RQ9BZR6 473 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 SH2D2AQ9NP31 389 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 OLAHQ9NV23 265 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 PCDHGA10Q9Y5H3 936 aa6.88□□□□□ -1.31
UBR3-205ENST00000439681 APC2O95996 2303 aa6.87□□□□□ -1.31
UBR3-205ENST00000439681 CLDN24A6NM45 220 aa6.87□□□□□ -1.31
UBR3-205ENST00000439681 ICOSLGO75144 302 aa6.87□□□□□ -1.31
UBR3-205ENST00000439681 GMNNO75496 209 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms