RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 TTYH2Q9BSA4 534 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ACTRT3Q9BYD9 372 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 OR2B2Q9GZK3 357 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 HOXD1Q9GZZ0 328 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 ACBD3Q9H3P7 528 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 VIPAS39Q9H9C1 493 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 KCNJ16Q9NPI9 418 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SERHLQ9NQF3 203 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 DUSP22Q9NRW4 184 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 TAS2R10Q9NYW0 307 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SPRR3Q9UBC9 169 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 STOML1Q9UBI4 398 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 TNFRSF10DQ9UBN6 386 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 DKKL1Q9UK85 242 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 CAMK2AQ9UQM7 478 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 RNF6Q9Y252 685 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 SLC6A5Q9Y345 797 aa9.54□□□□□ -0.88
MCF2L-216ENST00000439475 NCOA6Q14686 2063 aaPredicted RBP9.54□□□□□ -0.88
MCF2L-216ENST00000439475 NCKAP5O14513 1909 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 PCNX1Q96RV3 2341 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 PRSS51A0A1B0GVH4 220 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 GXYLT2A0PJZ3 443 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 HSPB2A8KAH6 182 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 HMGB1P1B2RPK0 211 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 LINC01387J3KSC0 135 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 RNASET2O00584 256 aaKnown RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 SCDO00767 359 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 FADS1O60427 444 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 UTS2O95399 124 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 CPSF4O95639 269 aaKnown RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 EPPINO95925 133 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 IL2RAP01589 272 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 ACP2P11117 423 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 EFNA1P20827 205 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 ENDOUP21128 410 aaKnown RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 DPP4P27487 766 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 MSX1P28360 303 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 S100A3P33764 101 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 SOAT1P35610 550 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 DCTP40126 519 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 MAP3K8P41279 467 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 LRRC74AQ0VAA2 488 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 GANABQ14697 944 aaKnown RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 HSPB2Q16082 182 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 DUSP5Q16690 384 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 RIPPLY2Q5TAB7 128 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 NXNQ6DKJ4 435 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 HIST2H2BCQ6DN03 193 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 OR5M10Q6IEU7 315 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 OR4F3Q6IEY1 312 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 FIGNL1Q6PIW4 674 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 NCCRP1Q6ZVX7 275 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 CHMP1BQ7LBR1 199 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 MISPQ8IVT2 679 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 ULK2Q8IYT8 1036 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 SLC16A11Q8NCK7 471 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 LILRB4Q8NHJ6 448 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 LRRC8CQ8TDW0 803 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 DUSP19Q8WTR2 217 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 RNF138Q8WVD3 245 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 ZNF75CPQ92670 426 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 ARL8AQ96BM9 186 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 TESCQ96BS2 214 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 GIMAP5Q96F15 307 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 LRRC46Q96FV0 321 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 C16orf58Q96GQ5 468 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 SFXN2Q96NB2 322 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 YIPF4Q9BSR8 244 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 BTBD2Q9BX70 525 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 UGT2B28Q9BY64 529 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 PRDM14Q9GZV8 571 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 DSN1Q9H410 356 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 UBQLN4Q9NRR5 601 aa9.53□□□□□ -0.88
MCF2L-216ENST00000439475 SIRT3Q9NTG7 399 aaPredicted RBP9.53□□□□□ -0.88
MCF2L-216ENST00000439475 H3BNH8 94 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 SDHDO14521 159 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 NDUFB5O43674 189 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 KCNK2O95069 426 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 ANGPTL1O95841 491 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 AGR2O95994 175 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 GLI4P10075 376 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 PEPDP12955 493 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 COX6B1P14854 86 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 CPN1P15169 458 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 HK1P19367 917 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 TBXA2RP21731 343 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 MATN1P21941 496 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 CHMP24386 653 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 TIMP3P35625 211 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 GAS1P54826 345 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 EEFSECP57772 596 aaKnown RBP9.52□□□□□ -0.89
MCF2L-216ENST00000439475 HBA1P69905 142 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 OCRLQ01968 901 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 STX5Q13190 355 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 ZNF787Q6DD87 383 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 C6orf120Q7Z4R8 191 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 MARCH3Q86UD3 253 aa9.52□□□□□ -0.89
MCF2L-216ENST00000439475 LACC1Q8IV20 430 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms