RNA–Protein interactions for RNA: ENST00000439106.5

PRAME-209, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 3

Gene PRAME, Length 891 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-209ENST00000439106 MYBPHQ13203 477 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 MPP2Q14168 576 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 CHI3L2Q15782 390 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 HSPB2Q16082 182 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 SLC25A35Q3KQZ1 300 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 GRAMD1BQ3KR37 738 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 CYP27C1Q4G0S4 372 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 C6orf136Q5SQH8 315 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 IL23RQ5VWK5 629 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 FIGNL1Q6PIW4 674 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 POMZP3Q6PJE2 187 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 APOOLQ6UXV4 268 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 ZAR1Q86SH2 424 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 ZNF781Q8N8C0 355 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 FNDC5Q8NAU1 212 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 PPP1R14CQ8TAE6 165 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 ZBED6CLQ96FA7 236 aaPredicted RBP12.55□□□□□ -0.4
PRAME-209ENST00000439106 ZNF764Q96H86 408 aaPredicted RBP12.55□□□□□ -0.4
PRAME-209ENST00000439106 G6PC3Q9BUM1 346 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 C20orf27Q9GZN8 174 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 SIRT3Q9NTG7 399 aaPredicted RBP12.55□□□□□ -0.4
PRAME-209ENST00000439106 FBXO34Q9NWN3 711 aa12.55□□□□□ -0.4
PRAME-209ENST00000439106 MBD3L4A6NDZ8 208 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 MBD3L3A6NE82 208 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 MBD3L5A6NJ08 208 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 CLCA1A8K7I4 914 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 SHISA8B8ZZ34 492 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 FAM47E-STBD1D6RA91 191 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 H0YC42 278 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 DVL2O14641 736 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 ZIC3O60481 467 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 NKX2-2O95096 273 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 UTS2O95399 124 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 IL2RAP01589 272 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 BGNP21810 368 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 UQCRC1P31930 480 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 GCKP35557 465 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 TIMP3P35625 211 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 SERPINB5P36952 375 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 MAP3K8P41279 467 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 ASMTP46597 345 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 LHX2P50458 406 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 RNF144AP50876 292 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 TPD52P55327 224 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 CLDN18P56856 261 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 B3GALT5-AS1P59052 145 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 PSPHP78330 225 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 MRPS22P82650 360 aaKnown RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 FOXF2Q12947 444 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 RCAN2Q14206 197 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 DUSP5Q16690 384 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 CCNJQ5T5M9 372 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 ENPP6Q6UWR7 440 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 UBQLNLQ8IYU4 475 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 FADS6Q8N9I5 356 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 GATSQ8NAP1 163 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 SLC16A11Q8NCK7 471 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 MBD3L2Q8NHZ7 208 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 JADE3Q92613 823 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 TUBGCP3Q96CW5 907 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 FAM120BQ96EK7 910 aaKnown RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 MS4A4EQ96PG1 132 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 SH3GL2Q99962 352 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 MCCC2Q9HCC0 563 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 ACSS1Q9NUB1 689 aaPredicted RBP12.54□□□□□ -0.4
PRAME-209ENST00000439106 ATP6V1HQ9UI12 483 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 ITGB1BP2Q9UKP3 347 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 L3MBTL1Q9Y468 752 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 CELSR1Q9NYQ6 3014 aa12.54□□□□□ -0.4
PRAME-209ENST00000439106 CD8B2A6NJW9 211 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ENO4A6NNW6 628 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 TMEM114B3SHH9 223 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 EMC8O43402 210 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 KCNH1O95259 989 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ANGPTL1O95841 491 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 C6orf47O95873 294 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 G6PDP11413 515 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ZNF708P17019 499 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 HK1P19367 917 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 MAPK1P28482 360 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 DGKQP52824 942 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 DSCR4P56555 118 aaPredicted RBP12.53□□□□□ -0.4
PRAME-209ENST00000439106 ABCE1P61221 599 aaKnown RBP12.53□□□□□ -0.4
PRAME-209ENST00000439106 RAET1LQ5VY80 246 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 MFSD12Q6NUT3 480 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 R3HCC1LQ7Z5L2 792 aaKnown RBP12.53□□□□□ -0.4
PRAME-209ENST00000439106 TMEM200AQ86VY9 491 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ZZZ3Q8IYH5 903 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ZPLD1Q8TCW7 415 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 DUSP19Q8WTR2 217 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 NRGNQ92686 78 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 HOXB13Q92826 284 aaPredicted RBP12.53□□□□□ -0.4
PRAME-209ENST00000439106 MTERF3Q96E29 417 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 CHMP6Q96FZ7 201 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 KLHDC3Q9BQ90 382 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ZNF559Q9BR84 538 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 KCNK9Q9NPC2 374 aa12.53□□□□□ -0.4
PRAME-209ENST00000439106 ZCCHC3Q9NUD5 404 aaKnown RBP12.53□□□□□ -0.4
PRAME-209ENST00000439106 FAM120CQ9NX05 1096 aaKnown RBP12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms