RNA–Protein interactions for RNA: ENST00000438801.1

HMGB1P18-201, Transcript of high mobility group box 1 pseudogene 18, humanhuman

BASIC

Gene HMGB1P18, Length 619 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P18-201ENST00000438801 CSH1P0DML2 217 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CSH2P0DML3 217 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 HOXD13P35453 343 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CLDN15P56746 228 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ABCE1P61221 599 aaKnown RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 IGLV3-21P80748 117 aaPredicted RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 BAATQ14032 418 aaPredicted RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 NTRK2Q16620 822 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CDKN3Q16667 212 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 C2orf83Q53S99 150 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 LYPLAL1Q5VWZ2 237 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CFAP161Q6P656 301 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CYB5D1Q6P9G0 228 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRSS55Q6UWB4 352 aaPredicted RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 IGFL3Q6UXB1 125 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 LINC00346Q8IVM7 164 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ELMOD1Q8N336 334 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 RYBPQ8N488 228 aaPredicted RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCDC89Q8N998 374 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 TSPAN14Q8NG11 270 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR4C6Q8NH72 309 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ITLN1Q8WWA0 313 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC22A18Q96BI1 424 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CCDC127Q96BQ5 260 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMCO6Q96DC7 493 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ERP27Q96DN0 273 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 PHYHIPLQ96FC7 376 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 CELF6Q96J87 481 aaKnown RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 RSPH9Q9H1X1 276 aaPredicted RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 IL1RAPQ9NPH3 570 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 KLK11Q9UBX7 282 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 DDX25Q9UHL0 483 aaKnown RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 NOL7Q9UMY1 257 aaKnown RBP2□□□□□ -2.09
HMGB1P18-201ENST00000438801 AUP1Q9Y679 476 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 PLXNA2O75051 1894 aa2□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZBED9Q6R2W3 1325 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 TRAV24A0A0B4J272 114 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 A0A1W2PRQ8 180 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 NKX2-6A6NCS4 301 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 TRIM77I1YAP6 450 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 K7EQG2 157 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 RTCAO00442 366 aaKnown RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PTGESO14684 152 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CASC3O15234 703 aaKnown RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZNF749O43361 778 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ATP6AP2O75787 350 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRAMEF12O95522 483 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 LGALS2P05162 132 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CSN3P07498 182 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ALPPL2P10696 532 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CD22P20273 847 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 C4BPBP20851 252 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ASCL1P50553 236 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CASP9P55211 416 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 STXBP2Q15833 593 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM120AOSQ5T036 256 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 LINC00242Q5T6M2 205 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAM205BPQ63HN1 556 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 GUSBP11Q6P575 273 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 KRT74Q7RTS7 529 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CARM1Q86X55 608 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 NKAIN3Q8N8D7 197 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR9Q2Q8NGE9 314 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 KIAA1524Q8TCG1 905 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRPF31Q8WWY3 499 aaKnown RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PROX1Q92786 737 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 NUS1Q96E22 293 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 RSRC1Q96IZ7 334 aaKnown RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 SPATA33Q96N06 139 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ZNF830Q96NB3 372 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 REG4Q9BYZ8 158 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 SDCBP2Q9H190 292 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 GHITMQ9H3K2 345 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 MOB1AQ9H8S9 216 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ANKZF1Q9H8Y5 726 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 SLC38A10Q9HBR0 1119 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 OLAHQ9NV23 265 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 NECAP2Q9NVZ3 263 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 IL36AQ9UHA7 158 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 CHORDC1Q9UHD1 332 aaPredicted RBP1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PILRAQ9UKJ1 303 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 ASB3Q9Y575 518 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 DNAH11Q96DT5 4516 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 FAT1Q14517 4588 aa1.99□□□□□ -2.09
HMGB1P18-201ENST00000438801 PLIN4Q96Q06 1357 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 NEDD4P46934 1319 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MED12Q93074 2177 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MYH1P12882 1939 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 GLOD5A6NK44 160 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 PRRG1O14668 218 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 HDAC3O15379 428 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 MAGEB2O15479 319 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 TNFSF12O43508 249 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 QDPRP09417 244 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 OR1G1P47890 313 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 IFNAR2P48551 515 aa1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 RPL34P49207 117 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 POLR2LP62875 67 aaKnown RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 CDC37Q16543 378 aaPredicted RBP1.98□□□□□ -2.09
HMGB1P18-201ENST00000438801 TMEM44Q2T9K0 475 aa1.98□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms