RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 SCO2O43819 266 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 HMGN2P05204 90 aaKnown RBP22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 KRT16P08779 473 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 ACP2P11117 423 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 LASP1Q14847 261 aaKnown RBP22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 RTL6Q6ICC9 239 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 BHLHB9Q6PI77 547 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 IFNEQ86WN2 208 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 GOLGA6L1Q8N7Z2 621 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 COX18Q8N8Q8 333 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 OR8J2Q8NGG1 315 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 OR10Q1Q8NGQ4 319 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 FBXO30Q8TB52 745 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 SFXN5Q8TD22 340 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 ARL8AQ96BM9 186 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 STACQ99469 402 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 UGT2B28Q9BY64 529 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 TBL1XR1Q9BZK7 514 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 PRDM14Q9GZV8 571 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 CXorf36Q9H7Y0 433 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 DUSP22Q9NRW4 184 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 GIN1Q9NXP7 522 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 TAS2R10Q9NYW0 307 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 DKKL1Q9UK85 242 aa22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 FAF1Q9UNN5 650 aaPredicted RBP22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 MRPS18CQ9Y3D5 142 aaKnown RBP22.51■■□□□ 1.19
RAPGEF1-206ENST00000438647 UTS2O95399 124 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 GLI4P10075 376 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 BMP7P18075 431 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 GRNP28799 593 aaKnown RBP22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 LCN1P31025 176 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 CLNS1AP54105 237 aaKnown RBP22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 TP53BP2Q13625 1128 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 CDSNQ15517 529 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 DUSP5Q16690 384 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 DPY19L1Q2PZI1 675 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 CRYBG3Q68DQ2 2970 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 OR5M10Q6IEU7 315 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 HDXQ7Z353 690 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 NUDT8Q8WV74 236 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 CHMP6Q96FZ7 201 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 C16orf58Q96GQ5 468 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 ATP6V1G3Q96LB4 118 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 G6PC3Q9BUM1 346 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 MARCOQ9UEW3 520 aaPredicted RBP22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 FBXL2Q9UKC9 423 aa22.5■■□□□ 1.19
RAPGEF1-206ENST00000438647 RNASET2O00584 256 aaKnown RBP22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 SDHDO14521 159 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 KLF11O14901 512 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 KCNK2O95069 426 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 KIR3DL1P43629 444 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 DSCR4P56555 118 aaPredicted RBP22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 OCRLQ01968 901 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 EXOSC6Q5RKV6 272 aaKnown RBP22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 CDC73Q6P1J9 531 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 AAGABQ6PD74 315 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 ENPP6Q6UWR7 440 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 VPS37AQ8NEZ2 397 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 LILRB4Q8NHJ6 448 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 TESCQ96BS2 214 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 YIPF4Q9BSR8 244 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 BTBD2Q9BX70 525 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 ACTRT3Q9BYD9 372 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 PIGUQ9H490 435 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 PTGES2Q9H7Z7 377 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 FLRT3Q9NZU0 649 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 PCDHGB4Q9UN71 923 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 CAMK2AQ9UQM7 478 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 NAV2Q8IVL1 2488 aa22.49■■□□□ 1.19
RAPGEF1-206ENST00000438647 MAST4O15021 2626 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 CACNA1CQ13936 2221 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 IGKV1D-16P01601 117 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 KITP10721 976 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 DPP4P27487 766 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 HBA1P69905 142 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 POU6F2P78424 691 aaPredicted RBP22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 C17orf67Q0P5P2 114 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 STX5Q13190 355 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 GANABQ14697 944 aaKnown RBP22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 RIPPLY2Q5TAB7 128 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 ANXA8L1Q5VT79 327 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 OR4F3Q6IEY1 312 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 SPATA19Q7Z5L4 167 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 WDR75Q8IWA0 830 aaKnown RBP22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 FADS6Q8N9I5 356 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 FAM110BQ8TC76 370 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 ADAMTS15Q8TE58 950 aa22.48■■□□□ 1.19
RAPGEF1-206ENST00000438647 CENPEQ02224 2701 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 NGFRP08138 427 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 SOAT1P35610 550 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 ZFP36L2P47974 494 aaKnown RBP22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 GRAMD1BQ3KR37 738 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 ACSF3Q4G176 576 aaPredicted RBP22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 FIGNL1Q6PIW4 674 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 LACC1Q8IV20 430 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 CCDC71Q8IV32 467 aaPredicted RBP22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 PIWIL2Q8TC59 973 aaKnown RBP22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 MARVELD3Q96A59 401 aa22.47■■□□□ 1.19
RAPGEF1-206ENST00000438647 WDYHV1Q96HA8 205 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms