RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 KLHL17Q6TDP4 642 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 DGAT2L6Q6ZPD8 337 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 PLEKHM3Q6ZWE6 761 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 BMP8AQ7Z5Y6 402 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 GPR141Q7Z602 305 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 P3H2Q8IVL5 708 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 METTL27Q8N6F8 245 aaPredicted RBP14.27□□□□□ -0.12
SGCE-205ENST00000437425 ZNF615Q8N8J6 731 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 SIMC1Q8NDZ2 872 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 OR14A16Q8NHC5 309 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 TRUB1Q8WWH5 349 aaKnown RBP14.27□□□□□ -0.12
SGCE-205ENST00000437425 PIK3R3Q92569 461 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 DIO2Q92813 273 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 GTPBP3Q969Y2 492 aaKnown RBP14.27□□□□□ -0.12
SGCE-205ENST00000437425 ZG16BQ96DA0 208 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 MCHR1Q99705 422 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 CNPPD1Q9BV87 410 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 HOXD1Q9GZZ0 328 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 NECTIN3Q9NQS3 549 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.27□□□□□ -0.12
SGCE-205ENST00000437425 IMPAD1Q9NX62 359 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 RARRES3Q9UL19 164 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 ERVK-19Q9WJR5 959 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 PCDHGB2Q9Y5G2 931 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 MAU2Q9Y6X3 613 aa14.27□□□□□ -0.12
SGCE-205ENST00000437425 A0A1W2PQM1 296 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 CDHR4A6H8M9 788 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 ZAR1LA6NP61 321 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 C17orf105B2RV13 164 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 ZNF701M0R085 212 aaPredicted RBP14.26□□□□□ -0.13
SGCE-205ENST00000437425 POLR1CO15160 346 aaPredicted RBP14.26□□□□□ -0.13
SGCE-205ENST00000437425 CYC1P08574 325 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 MYF5P13349 255 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 SSTR4P31391 388 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 RORAP35398 523 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 PLA2G5P39877 138 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 OR1D4P47884 311 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 CDH15P55291 814 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 TARDBPQ13148 414 aaKnown RBP eCLIP14.26□□□□□ -0.13
SGCE-205ENST00000437425 TUBA3CQ13748 450 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.26□□□□□ -0.13
SGCE-205ENST00000437425 ZNF574Q6ZN55 896 aaPredicted RBP14.26□□□□□ -0.13
SGCE-205ENST00000437425 OLIG3Q7RTU3 272 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 COMTD1Q86VU5 262 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 TMEM151BQ8IW70 566 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 CLIP4Q8N3C7 705 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 MORN4Q8NDC4 146 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 PLPP5Q8NEB5 264 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 OR4K5Q8NGD3 323 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 IFI44Q8TCB0 444 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 GNPDA2Q8TDQ7 276 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 ACOT11Q8WXI4 607 aaPredicted RBP14.26□□□□□ -0.13
SGCE-205ENST00000437425 MAN2C1Q9NTJ4 1040 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 PLCXD1Q9NUJ7 323 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 DHCR7Q9UBM7 475 aaKnown RBP14.26□□□□□ -0.13
SGCE-205ENST00000437425 CHST2Q9Y4C5 530 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 PCDHGB1Q9Y5G3 927 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 CLCA3PQ9Y6N3 262 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 TECTAO75443 2155 aa14.26□□□□□ -0.13
SGCE-205ENST00000437425 IGHV5-10-1A0A0J9YXX1 117 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 TCRBV16S1A1N1A0A5B0 115 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 SH3D21A4FU49 640 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ONECUT2O95948 504 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 SP9P0CG40 484 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 DRD5P21918 477 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 PPICP45877 212 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 PGDP52209 483 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 RHAGQ02094 409 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 PTGES3Q15185 160 aaKnown RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 SEC23BQ15437 767 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ZNF141Q15928 474 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 MINDY4Q4G0A6 757 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ENTPD8Q5MY95 495 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 CCNJQ5T5M9 372 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 MFSD4BQ5TF39 518 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 FOXB2Q5VYV0 432 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 FIGNL1Q6PIW4 674 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 KCTD8Q6ZWB6 473 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 SLITRK4Q8IW52 837 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 RNF113BQ8IZP6 322 aaKnown RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 SVOPQ8N4V2 548 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 BPIFB6Q8NFQ5 453 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 C16orf52Q8NHV5 167 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 RHOXF1Q8NHV9 184 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 PIGXQ8TBF5 258 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 FAM81AQ8TBF8 368 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 SENP5Q96HI0 755 aaPredicted RBP14.25□□□□□ -0.13
SGCE-205ENST00000437425 NODALQ96S42 347 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 WFDC6Q9BQY6 131 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 ZNF559Q9BR84 538 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 DUSP21Q9H596 190 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 CXorf56Q9H5V9 222 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 CBLCQ9ULV8 474 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 OR10H1Q9Y4A9 318 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 NCOR1O75376 2440 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 BDP1A6H8Y1 2624 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 IGLV3-12A0A075B6K2 115 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 GXYLT2A0PJZ3 443 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 TRAPPC13A5PLN9 417 aa14.25□□□□□ -0.13
SGCE-205ENST00000437425 OR6C76A6NM76 312 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms