RNA–Protein interactions for RNA: ENST00000437340.5

CPNE1-216, Transcript of copine 1, humanhuman

TSL 1 (best)

Gene CPNE1, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-216ENST00000437340 OR52R1Q8NGF1 315 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 ACOT11Q8WXI4 607 aaPredicted RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 PIK3R3Q92569 461 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 RBM18Q96H35 190 aaKnown RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 PEX11GQ96HA9 241 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 LMF2Q9BU23 707 aaKnown RBP23.91■■□□□ 1.42
CPNE1-216ENST00000437340 PRR14Q9BWN1 585 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 ERVMER34-1Q9H9K5 563 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 CSNK1G3Q9Y6M4 447 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 RNF215Q9Y6U7 377 aa23.91■■□□□ 1.42
CPNE1-216ENST00000437340 H0YIG0 161 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 TMX2-CTNND1H3BSU7 103 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 HRO43593 1189 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 MAN1A2O60476 641 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 BRINP1O60477 761 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 GABRA3P34903 492 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 SLC15A1P46059 708 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 ST3GAL4Q11206 333 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 ZNF155Q12901 538 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-216ENST00000437340 TSPAN31Q12999 210 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 RRM2BQ7LG56 351 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 RANBP3LQ86VV4 465 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-216ENST00000437340 P2RY8Q86VZ1 359 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 C1orf210Q8IVY1 113 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 PIGXQ8TBF5 258 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 GPA33Q99795 319 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 ITPAQ9BY32 194 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 ARMC7Q9H6L4 198 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 SLC25A19Q9HC21 320 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 NECTIN3Q9NQS3 549 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 PRTFDC1Q9NRG1 225 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 ENAMQ9NRM1 1142 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 LRIT1Q9P2V4 623 aa23.9■■□□□ 1.42
CPNE1-216ENST00000437340 HEMK1Q9Y5R4 338 aaPredicted RBP23.9■■□□□ 1.42
CPNE1-216ENST00000437340 SLC22A1O15245 554 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 NUDT21O43809 227 aaKnown RBP23.89■■□□□ 1.42
CPNE1-216ENST00000437340 ZNF182P17025 639 aaPredicted RBP23.89■■□□□ 1.42
CPNE1-216ENST00000437340 GIPRP48546 466 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 CSTF1Q05048 431 aaKnown RBP23.89■■□□□ 1.42
CPNE1-216ENST00000437340 SRSF5Q13243 272 aaKnown RBP23.89■■□□□ 1.42
CPNE1-216ENST00000437340 IRF3Q14653 427 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 SLC25A30Q5SVS4 291 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 DGAT2L6Q6ZPD8 337 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 RIT1Q92963 219 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 SLC41A3Q96GZ6 507 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 CRELD1Q96HD1 420 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 CDCA4Q9BXL8 241 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 POLDIP3Q9BY77 421 aaKnown RBP23.89■■□□□ 1.42
CPNE1-216ENST00000437340 IRAK4Q9NWZ3 460 aa23.89■■□□□ 1.42
CPNE1-216ENST00000437340 ZNF749O43361 778 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 LCKP06239 509 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 STSP08842 583 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 ZNF136P52737 540 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 HSD17B7P56937 341 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 LSM11P83369 360 aaKnown RBP eCLIP23.88■■□□□ 1.41
CPNE1-216ENST00000437340 CDK5Q00535 292 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 AQP6Q13520 282 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 GRM7Q14831 915 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 ZNHIT3Q15649 155 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-216ENST00000437340 MAPK14Q16539 360 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 OCLNQ16625 522 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 GDF7Q7Z4P5 450 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 ZNF578Q96N58 590 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-216ENST00000437340 RBCK1Q9BYM8 510 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 SCN2AQ99250 2005 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 CLDN24A6NM45 220 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 FMO6PO60774 539 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 BIKQ13323 160 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 RASSF6Q6ZTQ3 369 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 GAB3Q8WWW8 586 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 MMABQ96EY8 250 aaPredicted RBP23.88■■□□□ 1.41
CPNE1-216ENST00000437340 AHCYL2Q96HN2 611 aaKnown RBP23.88■■□□□ 1.41
CPNE1-216ENST00000437340 IL4I1Q96RQ9 567 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 ALOXE3Q9BYJ1 711 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 SELENONQ9NZV5 590 aa23.88■■□□□ 1.41
CPNE1-216ENST00000437340 SDK1Q7Z5N4 2213 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 CENPVL1A0A0U1RR11 272 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 TGFBR3LH3BV60 316 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 ENTPD6O75354 484 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 OMPP47874 163 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 SMSP52788 366 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 HOXC5Q00444 222 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 GINS1Q14691 196 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 MEDAGQ5VYS4 303 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 PRICKLE2Q7Z3G6 844 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 FAM26EQ8N5C1 309 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 DGAT2Q96PD7 388 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 FOLH1BQ9HBA9 442 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 CLDN16Q9Y5I7 305 aa23.87■■□□□ 1.41
CPNE1-216ENST00000437340 IGHV1OR21-1A0A087WYE8 117 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 CDHR4A6H8M9 788 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 KCNK2O95069 426 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 THY1P04216 161 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 FPR3P25089 353 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 STT3AP46977 705 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 EMDP50402 254 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 MAT1AQ00266 395 aaKnown RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 PSG6Q00889 435 aa23.86■■□□□ 1.41
CPNE1-216ENST00000437340 DCTN2Q13561 401 aaKnown RBP23.86■■□□□ 1.41
CPNE1-216ENST00000437340 SPCS2Q15005 226 aa23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms