RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 PRR23D2P0DMB1 279 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 BRCA2P51587 3418 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 MTPNP58546 118 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PURAQ00577 322 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PRKCZQ05513 592 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 LRRC32Q14392 662 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TTLL4Q14679 1199 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 RSU1Q15404 277 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 C14orf28Q4W4Y0 310 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ENPP6Q6UWR7 440 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 LRRN1Q6UXK5 716 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 LAX1Q8IWV1 398 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 RYBPQ8N488 228 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 C15orf54Q8N8G6 183 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ZNF548Q8NEK5 533 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 OR2T12Q8NG77 320 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 OR11H7Q8NGC8 314 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 OR5M9Q8NGP3 310 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 MARS2Q96GW9 593 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 FCRL1Q96LA6 429 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ZNF583Q96ND8 569 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ADAM2Q99965 735 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PARPBPQ9NWS1 579 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TMEFF2Q9UIK5 374 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 FKBPLQ9UIM3 349 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 GJD2Q9UKL4 321 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 C5orf58C9J3I9 102 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 RFXAPO00287 272 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 IMPA2O14732 288 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PGRMC2O15173 223 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TSPAN3O60637 253 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 RGS11O94810 467 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 SIX6O95475 246 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 HPP00738 406 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ANXA5P08758 320 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 OR8U8P0C7N1 319 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TXNP10599 105 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 KCNE1P15382 129 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TAGLN2P37802 199 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TIAL1Q01085 375 aaKnown RBP eCLIP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ACVR1Q04771 509 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 CDH18Q13634 790 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 BOP1Q14137 746 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 C6orf136Q5SQH8 315 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TAPT1Q6NXT6 567 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 GCNT2Q8N0V5 402 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 FAM160A2Q8N612 972 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 MRGPRDQ8TDS7 321 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 RRNAD1Q96FB5 475 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 IMP4Q96G21 291 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 FAM71F1Q96KD3 344 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 CCDC74BQ96LY2 380 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PPM1MQ96MI6 270 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 KLHL5Q96PQ7 755 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 OR14A2Q96R54 314 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ELF4Q99607 663 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 TXN2Q99757 166 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 ATG101Q9BSB4 218 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PRR14Q9BWN1 585 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 SLC39A8Q9C0K1 460 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 SLC38A1Q9H2H9 487 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 PIGMQ9H3S5 423 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 LTB4R2Q9NPC1 389 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 SEMA4BQ9NPR2 832 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 GAR1Q9NY12 217 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 H2AFY2Q9P0M6 372 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 MARCH4Q9P2E8 410 aaPredicted RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 LIMD1Q9UGP4 676 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 HACL1Q9UJ83 578 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 NDRG4Q9ULP0 352 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 NDRG2Q9UN36 371 aaKnown RBP6.91□□□□□ -1.3
GARNL3-205ENST00000435213 MICAL3Q7RTP6 2002 aa6.91□□□□□ -1.3
GARNL3-205ENST00000435213 FZD9O00144 591 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 KLK8O60259 260 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 PRAMEF2O60811 474 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 ABLIM3O94929 683 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 AK1P00568 194 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
GARNL3-205ENST00000435213 ADH1AP07327 375 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 FAM157BP0CG42 384 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 HOXD8P13378 290 aaPredicted RBP6.9□□□□□ -1.3
GARNL3-205ENST00000435213 ZNF44P15621 663 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 RPS12P25398 132 aaKnown RBP6.9□□□□□ -1.3
GARNL3-205ENST00000435213 BDKRB2P30411 391 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 HOXA9P31269 272 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 DNAJA1P31689 397 aaKnown RBP6.9□□□□□ -1.3
GARNL3-205ENST00000435213 MAGEB1P43366 347 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 SLC7A9P82251 487 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 GAB1Q13480 694 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 PTPRCAPQ14761 206 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 NKG7Q16617 165 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 ZNF549Q6P9A3 640 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 GCNT7Q6ZNI0 430 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 BHLHA9Q7RTU4 235 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 SPNS2Q8IVW8 549 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 FBXO16Q8IX29 292 aaPredicted RBP6.9□□□□□ -1.3
GARNL3-205ENST00000435213 FAM86B1Q8N7N1 296 aa6.9□□□□□ -1.3
GARNL3-205ENST00000435213 UBAC2Q8NBM4 344 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms