RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 VIPAS39Q9H9C1 493 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 GIMAP4Q9NUV9 329 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 NUDT4Q9NZJ9 180 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 REV1Q9UBZ9 1251 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 IKZF3Q9UKT9 509 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 TRIM33Q9UPN9 1127 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 LIPT1Q9Y234 373 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNF780BQ9Y6R6 833 aa7.06□□□□□ -1.28
ECHDC1-207ENST00000430841 MED12Q93074 2177 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 LRRC14BA6NHZ5 514 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 OR6C70A6NIJ9 312 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SYCE1LA8MT33 242 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 B2RBV5 119 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 DNALI1O14645 258 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SCO2O43819 266 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SSX4O60224 188 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ADAM11O75078 769 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CTAGE8P0CG41 777 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 GFAPP14136 432 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CPMP14384 443 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CPEP16870 476 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 FSTP19883 344 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CD22P20273 847 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 EPHA1P21709 976 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ME2P23368 584 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 GRK2P25098 689 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 GGT5P36269 586 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ELK3P41970 407 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CASP2P42575 452 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ALDH9A1P49189 494 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 MAPK12P53778 367 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 GP2P55259 537 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 DSCR9P59020 149 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 RAC1P63000 192 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 STX5Q13190 355 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ACAP2Q15057 778 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CYP1B1Q16678 543 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 TM4SF20Q53R12 229 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CCNYL2Q5T2Q4 361 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 PDSS1Q5T2R2 415 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 C6orf52Q5T4I8 152 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 RNASEH2BQ5TBB1 312 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 OR5M10Q6IEU7 315 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 MRM1Q6IN84 353 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 WDR93Q6P2C0 686 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 TTC27Q6P3X3 843 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 LARP4Q71RC2 724 aaKnown RBP eCLIP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ADGRE4PQ86SQ3 457 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ZC3HC1Q86WB0 502 aaKnown RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 CTAGE4Q8IX94 777 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SPATA6LQ8N4H0 392 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 TEX9Q8N6V9 391 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 PDPRQ8NCN5 879 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 FNDC9Q8TBE3 224 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 STAG3L4Q8TBR4 150 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SMAP2Q8WU79 429 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 FIG4Q92562 907 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 TMBIM1Q969X1 311 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ADIPOR1Q96A54 375 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 KLHL29Q96CT2 875 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 PBKQ96KB5 322 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 NODALQ96S42 347 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 ADOQ96SZ5 270 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SERPINI1Q99574 410 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 FAIM2Q9BWQ8 316 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 TSPYL1Q9H0U9 437 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 SMYD2Q9NRG4 433 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 PAQR5Q9NXK6 330 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 RNF14Q9UBS8 474 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 POU2F3Q9UKI9 436 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 KCNS2Q9ULS6 477 aa7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 RAI1Q7Z5J4 1906 aaPredicted RBP7.05□□□□□ -1.28
ECHDC1-207ENST00000430841 A0A0A6YYD5 115 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 A0A1W2PR48 441 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 FRG2CA6NGY1 282 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 TAPBPO15533 448 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 PHGDHO43175 533 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 UGT2B11O75310 529 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 EEDO75530 441 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 RGS9O75916 674 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 BCAS2O75934 225 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 TBX6O95947 436 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 GBAP04062 536 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 PABPC4LP0CB38 370 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CSNK2A2P19784 350 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 KIR2DL2P43627 348 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CLDN15P56746 228 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 HMGCS1Q01581 520 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 RUNX1T1Q06455 604 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 KRTAP1-1Q07627 177 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 ZNF155Q12901 538 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 IFT88Q13099 833 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CUL3Q13618 768 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 EXOSC7Q15024 291 aaKnown RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 CPSF6Q16630 551 aaKnown RBP eCLIP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 KRTAP24-1Q3LI83 254 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 TCHHL1Q5QJ38 904 aaPredicted RBP7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 SH2D4BQ5SQS7 431 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 LIPJQ5W064 366 aa7.04□□□□□ -1.28
ECHDC1-207ENST00000430841 GTF2IRD2BQ6EKJ0 949 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms