RNA–Protein interactions for RNA: ENST00000430118.1

HMGB3-203, Transcript of high mobility group box 3, humanhuman

TSL 1 (best)

Gene HMGB3, Length 529 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-203ENST00000430118 RTN4RL2Q86UN3 420 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 ZBTB8OSQ8IWT0 167 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 THEM5Q8N1Q8 247 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 MLKLQ8NB16 471 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 DENND6BQ8NEG7 585 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CCDC148Q8NFR7 591 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 ANGPTL6Q8NI99 470 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 FNDC8Q8TC99 324 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 METTL21AQ8WXB1 218 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 PIK3R3Q92569 461 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 HAS2Q92819 552 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CD101Q93033 1021 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 LGALS12Q96DT0 336 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 TMA16Q96EY4 203 aaKnown RBP3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CEP19Q96LK0 163 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 C4orf45Q96LM5 186 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 DUX5Q96PT3 197 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CCT8L2Q96SF2 557 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 RIT2Q99578 217 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 P2RY13Q9BPV8 354 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 SYT15Q9BQS2 421 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 SIKE1Q9BRV8 207 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CENPKQ9BS16 269 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 TMEM204Q9BSN7 226 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 SPATA16Q9BXB7 569 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 OR2B2Q9GZK3 357 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 NXF3Q9H4D5 531 aaKnown RBP3.65□□□□□ -1.83
HMGB3-203ENST00000430118 PRORYQ9H606 182 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 A4GALTQ9NPC4 353 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CD93Q9NPY3 652 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 ARMC1Q9NVT9 282 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 GTSE1Q9NYZ3 720 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 C19orf25Q9UFG5 118 aaPredicted RBP3.65□□□□□ -1.83
HMGB3-203ENST00000430118 KIAA1257Q9ULG3 409 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 CFL2Q9Y281 166 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 TDRD15B5MCY1 1934 aaKnown RBP3.65□□□□□ -1.83
HMGB3-203ENST00000430118 ATP8B3O60423 1300 aa3.65□□□□□ -1.83
HMGB3-203ENST00000430118 NAV2Q8IVL1 2488 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 IGLV3-22A0A075B6J6 115 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 SAA2-SAA4A0A096LPE2 208 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 TRBV5-5A0A0J9YX44 114 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MACROD2A1Z1Q3 448 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 SMCO2A6NFE2 343 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CENPBD1B2RD01 187 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 F8WDY8 70 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CHEK1O14757 476 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CASQ2O14958 399 aaPredicted RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ARPC1BO15143 372 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ACSL4O60488 711 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 STX10O60499 249 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 OR6B1O95007 311 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 PABPC4LP0CB38 370 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 IGHV4-38-2P0DP08 117 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 KRT5P13647 590 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 PRKACBP22694 351 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 RBMS1P29558 406 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CASP14P31944 242 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CHRNA3P32297 505 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MDH1P40925 334 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MAGEA11P43364 429 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 B3GALT5-AS1P59052 145 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 PSMC5P62195 406 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 LTBQ06643 244 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CKAP4Q07065 602 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 KLHL30Q0D2K2 578 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 LAMTOR4Q0VGL1 99 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MRPL28Q13084 256 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 GK2Q14410 553 aaPredicted RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 EMC2Q15006 297 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CNPY1Q3B7I2 92 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 DCAF4L1Q3SXM0 396 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 EOGTQ5NDL2 527 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 DCAF10Q5QP82 559 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CCNJQ5T5M9 372 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 RIPPLY2Q5TAB7 128 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF658Q5TYW1 1059 aaPredicted RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 RAET1GQ6H3X3 334 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 UGT3A1Q6NUS8 523 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ARMCX5Q6P1M9 558 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF549Q6P9A3 640 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 EMBQ6PCB8 327 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MACC1Q6ZN28 852 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 KCTD8Q6ZWB6 473 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 COX8CQ7Z4L0 72 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 STHQ8IWL8 128 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 NAGSQ8N159 534 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MARVELD2Q8N4S9 558 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 MREGQ8N565 214 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 FAM89BQ8N5H3 189 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 RNF148Q8N7C7 305 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 BBOF1Q8ND07 529 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 ZNF540Q8NDQ6 660 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 FAM71CQ8NEG0 241 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 OR56B1Q8NGI3 324 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 OR13C3Q8NGS6 347 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 SAP25Q8TEE9 199 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 SETD7Q8WTS6 366 aaKnown RBP3.64□□□□□ -1.83
HMGB3-203ENST00000430118 TCEAL4Q96EI5 215 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 NRBF2Q96F24 287 aa3.64□□□□□ -1.83
HMGB3-203ENST00000430118 CEP170P1Q96L14 293 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms