RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 FAM131CQ96AQ9 280 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC127Q96BQ5 260 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PSKH2Q96QS6 385 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRT12Q99456 494 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 TSG101Q99816 390 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC3Q9BQI4 270 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 LMF2Q9BU23 707 aaKnown RBP4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 NUP85Q9BW27 656 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 DGCR6LQ9BY27 220 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZWILCHQ9H900 591 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 ABCC13Q9NSE7 274 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PANK4Q9NVE7 773 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 SPASTQ9UBP0 616 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 PLAGL1Q9UM63 463 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 U3KQA8 63 aa4.06□□□□□ -1.76
HMGB3P5-201ENST00000428894 COL27A1Q8IZC6 1860 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 SPTY2D1-AS1A0A0U1RR47 76 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC162PA2VCL2 907 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 A6NCN8 305 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 LIN7AO14910 233 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 MCF2LO15068 1137 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CETN3O15182 167 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZW10O43264 779 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 RHOXF2BP0C7M4 288 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZSCAN5DPP0CG00 497 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC166P0CW27 439 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 GZMAP12544 262 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 UGT1A4P22310 534 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CTNNA1P35221 906 aaKnown RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 HSD17B2P37059 387 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 RABIFP47224 123 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 DSTNP60981 165 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 MRPS15P82914 257 aaKnown RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CYP24A1Q07973 514 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRRC74AQ0VAA2 488 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 AP1B1Q10567 949 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CETN1Q12798 172 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 DPYSQ14117 519 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 NFE2L1Q14494 772 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC153Q494R4 210 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PHLDA2Q53GA4 152 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PM20D1Q6GTS8 502 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 TMEM53Q6P2H8 277 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PAQR6Q6TCH4 344 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 Q6ZSR6 202 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 ABI3BPQ7Z7G0 1075 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 LUZP1Q86V48 1076 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PARGQ86W56 976 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 HORMAD1Q86X24 394 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZC3H3Q8IXZ2 948 aaKnown RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 KIRREL3Q8IZU9 778 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 SLC34A3Q8N130 599 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 OR8H1Q8NGG4 311 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 LMX1AQ8TE12 382 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PHLDA1Q8WV24 401 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 DNAJC19Q96DA6 116 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 USP28Q96RU2 1077 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 RHOXF2Q9BQY4 288 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 SMYD3Q9H7B4 428 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 SYNDIG1Q9H7V2 258 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 VPS37BQ9H9H4 285 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CYP3A43Q9HB55 503 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CCDC177Q9NQR7 707 aaPredicted RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 DYRK4Q9NR20 520 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 FGF21Q9NSA1 209 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 FAM49BQ9NUQ9 324 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PISDQ9UG56 409 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 CIDEBQ9UHD4 219 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 GRID1Q9ULK0 1009 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 TMCO1Q9UM00 188 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PPP1R3CQ9UQK1 317 aa4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 BZW2Q9Y6E2 419 aaKnown RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 NYNRINQ9P2P1 1898 aaKnown RBP4.05□□□□□ -1.76
HMGB3P5-201ENST00000428894 PRRC2CQ9Y520 2896 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 CSMD1Q96PZ7 3565 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LRRIQ3A6PVS8 624 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LMO7DNF2Z398 122 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 H3BQV1 296 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 FPGTO14772 594 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ACSL4O60488 711 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 PFDN1O60925 122 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 TSC22D2O75157 780 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 PTP4A3O75365 173 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 LUC7L3O95232 432 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 IGHV4-31P0DP07 118 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 VPREB1P12018 145 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ZNF3P17036 446 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 KRT20P35900 424 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ARSEP51690 589 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 TKTL1P51854 596 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 PAX9P55771 341 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ARF3P61204 181 aaPredicted RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 DCAF7P61962 342 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 RPS21P63220 83 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 SIRPAP78324 504 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 ARF1P84077 181 aaKnown RBP4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 CDK3Q00526 305 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 MC1RQ01726 317 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 INCA1Q0VD86 236 aa4.04□□□□□ -1.76
HMGB3P5-201ENST00000428894 CNTN1Q12860 1018 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms