RNA–Protein interactions for RNA: ENST00000428728.5

TRIM39-209, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 1,013 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-209ENST00000428728 FAM120CQ9NX05 1096 aaKnown RBP15.43■□□□□ 0.06
TRIM39-209ENST00000428728 TAS2R7Q9NYW3 318 aa15.43■□□□□ 0.06
TRIM39-209ENST00000428728 CCL27Q9Y4X3 112 aa15.43■□□□□ 0.06
TRIM39-209ENST00000428728 GXYLT2A0PJZ3 443 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 AKAP10O43572 662 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 ATE1O95260 518 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 UTS2O95399 124 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 IL33O95760 270 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 HRGP04196 525 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 CRHR1P34998 444 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 GPC1P35052 558 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 CLK3P49761 638 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 PSMD4P55036 377 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 SIRPAP78324 504 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 GANABQ14697 944 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 BCL2A1Q16548 175 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 ZNF385BQ569K4 471 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 LIPMQ5VYY2 423 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 GALNT10Q86SR1 603 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 CLHC1Q8NHS4 586 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 FBXO30Q8TB52 745 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 FIG4Q92562 907 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 PIK3R3Q92569 461 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 DACH2Q96NX9 599 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 LMF2Q9BU23 707 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 PINK1Q9BXM7 581 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 TBL1XR1Q9BZK7 514 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 PTGES2Q9H7Z7 377 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 PLEKHF2Q9H8W4 249 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 LRTM1Q9HBL6 345 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 MRTO4Q9UKD2 239 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 WBP11Q9Y2W2 641 aaKnown RBP15.42■□□□□ 0.06
TRIM39-209ENST00000428728 MTORP42345 2549 aa15.42■□□□□ 0.06
TRIM39-209ENST00000428728 OR2M5A3KFT3 312 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 A8MXE2 369 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 SHISA8B8ZZ34 492 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 SLC28A1O00337 649 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 GOSR1O95249 250 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 KRT4P19013 534 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 GABRA3P34903 492 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 SUCLG1P53597 346 aaKnown RBP15.41■□□□□ 0.06
TRIM39-209ENST00000428728 CLDN20P56880 219 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 RPL38P63173 70 aaKnown RBP15.41■□□□□ 0.06
TRIM39-209ENST00000428728 PCLAFQ15004 111 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 DEFB113Q30KQ7 82 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 GRAMD1BQ3KR37 738 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 OR2A2Q6IF42 318 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 CAMKMTQ7Z624 323 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 C10orf107Q8IVU9 208 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 OR2T11Q8NH01 316 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 DUSP19Q8WTR2 217 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 MBD6Q96DN6 1003 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 C1GALT1C1Q96EU7 318 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 TSSK3Q96PN8 268 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 FAM111AQ96PZ2 611 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 C1orf109Q9NX04 203 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 ZNF337Q9Y3M9 751 aa15.41■□□□□ 0.06
TRIM39-209ENST00000428728 SETD2Q9BYW2 2564 aaPredicted RBP15.41■□□□□ 0.06
TRIM39-209ENST00000428728 NUP214P35658 2090 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 A0A1W2PPR1 153 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 MSTNO14793 375 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 AZIN1O14977 448 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 RGS14O43566 566 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 KCNH1O95259 989 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 IGKV1D-16P01601 117 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 SDC1P18827 310 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 PRPH2P23942 346 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 PRKAG1P54619 331 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 CLDN15P56746 228 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 EEF1A1P68104 462 aaKnown RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 KIAA0040Q15053 153 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 EEF1A1P5Q5VTE0 462 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 PPP4R4Q6NUP7 873 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 EXOC3L1Q86VI1 746 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 TDRPQ86YL5 185 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 GPR151Q8TDV0 419 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 PPCDCQ96CD2 204 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 STARD4Q96DR4 205 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 ZNF845Q96IR2 970 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 CCT7Q99832 543 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 PIGQQ9BRB3 760 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 OPN3Q9H1Y3 402 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 C3orf14Q9HBI5 128 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 NDRG3Q9UGV2 375 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 MID2Q9UJV3 735 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 EIF3LQ9Y262 564 aaKnown RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 VDAC3Q9Y277 283 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 TESMINQ9Y4I5 508 aa15.4■□□□□ 0.06
TRIM39-209ENST00000428728 ZNF469Q96JG9 3925 aaPredicted RBP15.4■□□□□ 0.06
TRIM39-209ENST00000428728 ACANP16112 2415 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 CASKO14936 926 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 ANGPTL1O95841 491 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 CRHP06850 196 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 LINC00032P0C843 101 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 PRPS2P11908 318 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 NEFHP12036 1026 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 EFNA1P20827 205 aaPredicted RBP15.39■□□□□ 0.05
TRIM39-209ENST00000428728 ADAM8P78325 824 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 FAM27E3Q08E93 113 aa15.39■□□□□ 0.05
TRIM39-209ENST00000428728 PON3Q15166 354 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms