RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 TIMMDC1Q9NPL8 285 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 EURLQ9NYK6 297 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ST14Q9Y5Y6 855 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 A0A1W2PPW3 197 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 TVP23AA6NH52 213 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 UBL4AP11441 157 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ZNF182P17025 639 aaPredicted RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 CD53P19397 219 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 HTR1EP28566 365 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CNR2P34972 360 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 EIF2B1Q14232 305 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 KIR2DS3Q14952 304 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ATP6AP1Q15904 470 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ZNF750Q32MQ0 723 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 TP53I3Q53FA7 332 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 DCST2Q5T1A1 773 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ZNF554Q86TJ5 538 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 FBXO27Q8NI29 283 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ARRDC2Q8TBH0 407 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ELP5Q8TE02 316 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ZUFSPQ96AP4 578 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ISG20Q96AZ6 181 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 L3HYPDHQ96EM0 354 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 SGCZQ96LD1 299 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CDX2Q99626 313 aaPredicted RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 SLC30A3Q99726 388 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 ICKQ9UPZ9 632 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 IER3IP1Q9Y5U9 82 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 MAP1BP46821 2468 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 NUDT21O43809 227 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 MAPK3P27361 379 aaPredicted RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 DPP6P42658 865 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 PGFP49763 221 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 SERTAD2Q14140 314 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 FAM26DQ5JW98 314 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 LCTLQ6UWM7 567 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CCDC107Q8WV48 283 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 PATE1Q8WXA2 126 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 PPP1R14BQ96C90 147 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 C3orf30Q96M34 536 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CNN2Q99439 309 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 PHOX2BQ99453 314 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 C6orf106Q9H6K1 298 aaPredicted RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 A0A1B0GV50 99 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 OTOL1A6NHN0 477 aaPredicted RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 C2CD4DB7Z1M9 353 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 NME4O00746 187 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CD3GP09693 182 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 F8A1P23610 371 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 PSMB10P40306 273 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 LTB4RQ15722 352 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 HES5Q5TA89 166 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 C12orf43Q96C57 262 aaKnown RBP9.17□□□□□ -0.94
SNX13-203ENST00000428135 PDXPQ96GD0 296 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 CDH10Q9Y6N8 788 aa9.17□□□□□ -0.94
SNX13-203ENST00000428135 HTR3BO95264 441 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 SIRPAP78324 504 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 RSU1Q15404 277 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 C3orf33Q6P1S2 294 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 XKRXQ6PP77 449 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 SLC37A3Q8NCC5 494 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 PSD4Q8NDX1 1056 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 VN1R2Q8NFZ6 395 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 WBP2Q969T9 261 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 ZNF285Q96NJ3 590 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 XIRP1Q702N8 1843 aaKnown RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 PRLP01236 227 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 CHRM4P08173 479 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 DDCP20711 480 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 CTHP32929 405 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 VASPP50552 380 aaPredicted RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 GPR18Q14330 331 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 ZBED5Q49AG3 693 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 TMEM69Q5SWH9 247 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 AWAT2Q6E213 333 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 RELL1Q8IUW5 271 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 SPNS2Q8IVW8 549 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 CPNE2Q96FN4 548 aaPredicted RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 MNTQ99583 582 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 OR10A4Q9H209 315 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 DPAGT1Q9H3H5 408 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 MBNL1Q9NR56 388 aaKnown RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 RIMS3Q9UJD0 308 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 CARD8Q9Y2G2 431 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 SMCHD1A6NHR9 2005 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 A0A0G2JPF8 293 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 HNRNPCL3B7ZW38 293 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 HNRNPCL4P0DMR1 293 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 FUT1P19526 365 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 AMY2BP19961 511 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 RGS6P49758 472 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 ARF1P84077 181 aaKnown RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 E2F1Q01094 437 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 GPR149Q86SP6 731 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 ZNF740Q8NDX6 193 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 HOXB13Q92826 284 aaPredicted RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 NMNAT1Q9HAN9 279 aaPredicted RBP9.16□□□□□ -0.94
SNX13-203ENST00000428135 ENTPD2Q9Y5L3 495 aa9.16□□□□□ -0.94
SNX13-203ENST00000428135 TRAPPC13A5PLN9 417 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms