RNA–Protein interactions for RNA: ENST00000427722.2

RFX3-AS1-202, RFX3 antisense RNA 1, humanhuman

TSL 5 BASIC

Gene RFX3-AS1, Length 1,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-AS1-202ENST00000427722 SLC9A6Q92581 669 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MTERF3Q96E29 417 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CHMP6Q96FZ7 201 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TIMP4Q99727 224 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 YIPF4Q9BSR8 244 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 UCK2Q9BZX2 261 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 OR2B2Q9GZK3 357 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C20orf27Q9GZN8 174 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SIRT3Q9NTG7 399 aaPredicted RBP8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZCCHC3Q9NUD5 404 aaKnown RBP8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ATAD3AQ9NVI7 634 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TAS2R10Q9NYW0 307 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PPP4R1LQ9P1A2 415 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 Q9UFV3 132 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MRTO4Q9UKD2 239 aaKnown RBP8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RAP2CQ9Y3L5 183 aa8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 UTP20O75691 2785 aaKnown RBP8.39□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 A0A1W2PRB8 838 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TTC36A6NLP5 189 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KDM4EB2RXH2 506 aaPredicted RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 H0Y3Z8 333 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EMC8O43402 210 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CBR3O75828 277 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 UTS2O95399 124 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C6orf47O95873 294 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 IGKV1D-16P01601 117 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ACP2P11117 423 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 BMP7P18075 431 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PRPS1L1P21108 318 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SRD5A2P31213 254 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PTGER4P35408 488 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SOAT1P35610 550 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KIR3DL1P43629 444 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RPL14P50914 215 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GAS1P54826 345 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PSMD4P55036 377 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PRR5P85299 388 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LASP1Q14847 261 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DUSP5Q16690 384 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 VPS26BQ4G0F5 336 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 VASNQ6EMK4 673 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MFSD12Q6NUT3 480 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LYPD4Q6UWN0 246 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SEM1Q6ZVN7 128 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 IFNEQ86WN2 208 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PM20D2Q8IYS1 436 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 COX18Q8N8Q8 333 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CDRT4Q8N9R6 151 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SLC16A11Q8NCK7 471 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 LILRB4Q8NHJ6 448 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CEP70Q8NHQ1 597 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RNF138Q8WVD3 245 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ABTB1Q969K4 478 aaPredicted RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FAM120BQ96EK7 910 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GIMAP5Q96F15 307 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SFXN2Q96NB2 322 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NUF2Q9BZD4 464 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TBL1XR1Q9BZK7 514 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PRDM14Q9GZV8 571 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RUBCNLQ9H714 662 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 AKTIPQ9H8T0 292 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 C3orf14Q9HBI5 128 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 KCNJ16Q9NPI9 418 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FAM120CQ9NX05 1096 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NKIRAS1Q9NYS0 192 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NOP53Q9NZM5 478 aaKnown RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MARCOQ9UEW3 520 aaPredicted RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ABCG2Q9UNQ0 655 aa8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RPH3AQ9Y2J0 694 aaPredicted RBP8.38□□□□□ -1.07
RFX3-AS1-202ENST00000427722 AHRRA9YTQ3 701 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 B4DXG7 233 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FAM47E-STBD1D6RA91 191 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CFLARO15519 480 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GMFGO60234 142 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FADS1O60427 444 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NKX2-2O95096 273 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SNUPNO95149 360 aaKnown RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ACTL6AO96019 429 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 HOXD4P09016 255 aaPredicted RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ALOX5P09917 674 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DPP4P27487 766 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 ZFP36L2P47974 494 aaKnown RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PRIM2P49643 509 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 DIO3P55073 304 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 EMX2Q04743 252 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 SRYQ05066 204 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MAD2L1Q13257 205 aaPredicted RBP8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 TP53BP2Q13625 1128 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CASP8Q14790 479 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MLC1Q15049 377 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 PGS1Q32NB8 556 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 GRAMD1BQ3KR37 738 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 NHSL2Q5HYW2 709 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 CCNJQ5T5M9 372 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RIPPLY2Q5TAB7 128 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 RAET1LQ5VY80 246 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MYO7BQ6PIF6 2116 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 FIGNL1Q6PIW4 674 aa8.37□□□□□ -1.07
RFX3-AS1-202ENST00000427722 MEX3BQ6ZN04 569 aaKnown RBP8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms