RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 NCF1BA6NI72 391 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MBD3L5A6NJ08 208 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 NCF1CA8MVU1 366 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SUPT3HB4E1H0 165 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 NTN3O00634 580 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CASC3O15234 703 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SUPT3HO75486 399 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 LYPLA1O75608 230 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ZBTB11O95625 1053 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MLYCDO95822 493 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GUCA1CO95843 209 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 HIST1H2AGP0C0S8 130 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CTSEP14091 401 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GFAPP14136 432 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 NCF1P14598 390 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 HIST1H2ADP20671 130 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GNLYP22749 145 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PRPH2P23942 346 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 APCP25054 2843 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CD1CP29017 333 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CAPZBP47756 277 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GABRA4P48169 554 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SLC1A6P48664 564 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ACADVLP49748 655 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FOXA1P55317 472 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PKNOX1P55347 436 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CSNK1G2P78368 415 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ZNF33BQ06732 778 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MN1Q10571 1320 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ASPHQ12797 758 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FOXD4Q12950 439 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CDC16Q13042 620 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PRKAA1Q13131 559 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PRKG2Q13237 762 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GTF2H2Q13888 395 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 KIR2DS3Q14952 304 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CLPPQ16740 277 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SLC5A12Q1EHB4 618 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MPEG1Q2M385 716 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FBXO48Q5FWF7 155 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 C10orf62Q5T681 223 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 LIPJQ5W064 366 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FAM219BQ5XKK7 198 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ATG9BQ674R7 924 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ATG16L1Q676U5 607 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CAPN13Q6MZZ7 669 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GTF2H2CQ6P1K8 395 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ANKRD12Q6UB98 2062 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 H1FNTQ75WM6 255 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SYVN1Q86TM6 617 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SLC9B2Q86UD5 537 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 TMEM200AQ86VY9 491 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 AMIGO1Q86WK6 493 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GATAD2AQ86YP4 633 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 LRRC34Q8IZ02 419 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 OR2C3Q8N628 320 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ZNF781Q8N8C0 355 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ENDOVQ8N8Q3 282 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 OR2L3Q8NG85 312 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 OR6C4Q8NGE1 309 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 OR14A16Q8NHC5 309 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CFAP61Q8NHU2 1237 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FAM110DQ8TAY7 271 aaPredicted RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 WDR20Q8TBZ3 569 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MAPK15Q8TD08 544 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 MGARPQ8TDB4 240 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 FAM216AQ8WUB2 273 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 RSC1A1Q92681 617 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PYCR2Q96C36 320 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 CHMP6Q96FZ7 201 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 APOLD1Q96LR9 279 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 H2AFJQ9BTM1 129 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 HGH1Q9BTY7 390 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SORBS1Q9BX66 1292 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PCBD2Q9H0N5 130 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ATG10Q9H0Y0 220 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 SPNS1Q9H2V7 528 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 RHBGQ9H310 441 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 NT5DC2Q9H857 520 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 NOL11Q9H8H0 719 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 DNAJC11Q9NVH1 559 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 GEMIN8Q9NWZ8 242 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 IL36RNQ9UBH0 155 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 OPTCQ9UBM4 332 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ZDHHC2Q9UIJ5 367 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 POMT2Q9UKY4 750 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PLAGL1Q9UM63 463 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 RAP2CQ9Y3L5 183 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 PRRC2CQ9Y520 2896 aaKnown RBP5.1□□□□□ -1.59
C9orf3-205ENST00000427193 DNAJC15Q9Y5T4 150 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 RNF215Q9Y6U7 377 aa5.1□□□□□ -1.59
C9orf3-205ENST00000427193 ANKHD1Q8IWZ3 2542 aaKnown RBP5.09□□□□□ -1.59
C9orf3-205ENST00000427193 CCDC168Q8NDH2 2452 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 MED13LQ71F56 2210 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 AKAP9Q99996 3911 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 GMNCA6NCL1 334 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 TCP11X1B4DZS4 312 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 E7EQ34 232 aa5.09□□□□□ -1.59
C9orf3-205ENST00000427193 POLR3GO15318 223 aaPredicted RBP5.09□□□□□ -1.59
C9orf3-205ENST00000427193 TOX3O15405 576 aaPredicted RBP5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms